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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • extracellular 3
  • endoplasmic reticulum 5
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90044 Canola extracellular, golgi 88.81 91.45
CDY38015 Canola endoplasmic reticulum 88.45 91.25
Bra032642.1-P Field mustard endoplasmic reticulum, golgi 87.91 90.86
CDY15167 Canola endoplasmic reticulum, golgi 90.97 90.81
Bra033251.1-P Field mustard endoplasmic reticulum, golgi 90.79 90.63
AT4G00360.1 Thale cress endoplasmic reticulum 88.63 88.79
PGSC0003DMT400097242 Potato cytosol 68.41 77.82
Solyc01g094750.2.1 Tomato endoplasmic reticulum, golgi 73.83 77.76
AT2G45970.1 Thale cress endoplasmic reticulum, golgi 73.29 75.61
KRH48115 Soybean endoplasmic reticulum 71.48 74.44
KRH64976 Soybean endoplasmic reticulum 71.3 74.11
VIT_15s0046g02380.t01 Wine grape endoplasmic reticulum, golgi 73.65 72.08
AT1G63710.1 Thale cress endoplasmic reticulum, golgi 65.88 69.79
OQU85673 Sorghum cytosol 62.09 69.64
TraesCS2A01G407500.1 Wheat endoplasmic reticulum 65.88 69.0
Zm00001d017528_P001 Maize endoplasmic reticulum 66.43 68.91
Zm00001d002687_P001 Maize endoplasmic reticulum 66.61 68.84
TraesCS2D01G404600.1 Wheat golgi 65.52 68.62
EES12648 Sorghum endoplasmic reticulum 66.43 68.4
TraesCS6D01G227200.1 Wheat endoplasmic reticulum 66.79 68.39
TraesCS2B01G425400.1 Wheat golgi 65.88 68.35
TraesCS6B01G279400.1 Wheat endoplasmic reticulum 66.43 68.02
Os02t0666500-01 Rice endoplasmic reticulum 65.16 67.86
TraesCS6A01G244900.1 Wheat endoplasmic reticulum, mitochondrion 66.25 67.71
HORVU6Hr1G064170.1 Barley plasma membrane 66.61 67.71
GSMUA_Achr5P19450_001 Banana endoplasmic reticulum 57.76 67.51
GSMUA_Achr5P12420_001 Banana endoplasmic reticulum 57.22 67.3
GSMUA_Achr4P26290_001 Banana endoplasmic reticulum, extracellular 64.26 67.04
Os04t0560100-01 Rice endoplasmic reticulum 65.7 66.79
AT5G58860.1 Thale cress endoplasmic reticulum 58.3 62.96
AT5G08250.2 Thale cress endoplasmic reticulum 42.96 43.27
AT1G34540.1 Thale cress endoplasmic reticulum 37.91 42.17
AT3G56630.1 Thale cress endoplasmic reticulum 37.91 42.08
AT5G23190.1 Thale cress endoplasmic reticulum 42.24 41.86
AT1G13150.1 Thale cress endoplasmic reticulum 38.27 40.08
AT1G13140.1 Thale cress endoplasmic reticulum 37.18 38.58
AT1G24540.1 Thale cress endoplasmic reticulum, golgi 35.56 37.74
AT3G26125.1 Thale cress endoplasmic reticulum 35.56 36.41
AT2G27690.1 Thale cress endoplasmic reticulum 32.49 36.36
AT3G01900.1 Thale cress endoplasmic reticulum 32.49 36.29
AT3G48520.1 Thale cress endoplasmic reticulum 32.67 35.77
AT5G63450.2 Thale cress endoplasmic reticulum, plasma membrane, plastid 31.41 30.63
Protein Annotations
Gene3D:1.10.630.10MapMan:21.9.1.1EntrezGene:839347UniProt:A0A178WHA9ProteinID:AAF81318.1ProteinID:AEE27310.1
EMBL:AK117400ArrayExpress:AT1G01600EnsemblPlantsGene:AT1G01600RefSeq:AT1G01600TAIR:AT1G01600RefSeq:AT1G01600-TAIR-G
EnsemblPlants:AT1G01600.1TAIR:AT1G01600.1Unigene:At.28042Symbol:CYP86A4InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488
GO:GO:0005506GO:GO:0005575GO:GO:0006629GO:GO:0006631GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705GO:GO:0018685
GO:GO:0020037GO:GO:0046872GO:GO:0055114GO:GO:0070330InterPro:IPR036396RefSeq:NP_171666.1
ProteinID:OAP16492.1PFAM:PF00067PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0004507PO:PO:0007611PO:PO:0007616PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020038PO:PO:0025022
PO:PO:0025281PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24296PANTHER:PTHR24296:SF9
UniProt:Q9LMM1SUPFAM:SSF48264UniParc:UPI000009EB28SEG:seg::
Description
CYP86A4Cytochrome P450 86A4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMM1]
Coordinates
chr1:+:218834..221286
Molecular Weight (calculated)
62606.8 Da
IEP (calculated)
8.099
GRAVY (calculated)
-0.101
Length
554 amino acids
Sequence
(BLAST)
001: MEISNAMLLV AIVTGYWLWF KRISRWLKGP RVWPLLGSLP GLIEQRDRMH EWITENLRAC GGTYQTCIFA VPFLAKKQGL VTVTCDPKNL EHMLKTRFDN
101: YPKGPTWQSV FHDLLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMGRW VNRGIKLRFC PILATAQDNA EPVDLQDLIL RLTFDNICGL AFGKDTRTCA
201: PGLPENGFAS AFDRATEASL QRFIIPKFMW KLKKWLGLGL EVSLSRSLGE IDEYLAAVIN TRKQELMSQQ ESGTHQRHDD LLSRFMMKKT ESYSDTFLQH
301: VALNFILAGR DTSSVALSWF FWLITMHPTV EDKIVREICS VLIETRGTDD VASWTEEPLG FDEIDRLVYL KAAISETLRL YPSVPEDSKH VENDDVLPDG
401: TFVPAGSSVT YSIYAAGRMK STWGEDCLEF NPERWISPID GKFINHDQYR FVAFNAGPRI CLGKDLAYLQ MKTIAAAVLL RHRLTVVPGH KVEQKMSLTL
501: FMKNGLLVNL YKRDLQGIIK SLVVKKSDGV SNGQCNGVIG EGVAVYLNTG VAVV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.