Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27586 | Canola | endoplasmic reticulum | 81.03 | 83.27 |
| CDX84956 | Canola | endoplasmic reticulum | 80.27 | 83.13 |
| Bra032794.1-P | Field mustard | cytosol | 73.37 | 81.66 |
| VIT_03s0017g01070.t01 | Wine grape | endoplasmic reticulum, golgi | 55.94 | 58.63 |
| AT3G26125.1 | Thale cress | endoplasmic reticulum | 60.73 | 58.6 |
| VIT_01s0137g00410.t01 | Wine grape | endoplasmic reticulum, extracellular | 60.34 | 56.25 |
| AT1G13140.1 | Thale cress | endoplasmic reticulum | 56.32 | 55.06 |
| AT1G13150.1 | Thale cress | endoplasmic reticulum | 54.98 | 54.25 |
| TraesCS6D01G193600.1 | Wheat | golgi | 51.72 | 52.33 |
| HORVU6Hr1G053810.2 | Barley | endoplasmic reticulum | 52.11 | 51.71 |
| GSMUA_Achr10P... | Banana | golgi, mitochondrion | 49.04 | 50.39 |
| EES07097 | Sorghum | golgi | 51.72 | 50.37 |
| Zm00001d050977_P001 | Maize | mitochondrion | 51.34 | 50.19 |
| Os02t0596300-01 | Rice | cytosol, peroxisome | 46.55 | 50.0 |
| TraesCS6B01G239400.1 | Wheat | mitochondrion | 51.92 | 49.27 |
| TraesCS6A01G210500.1 | Wheat | mitochondrion | 48.47 | 49.03 |
| AT5G08250.2 | Thale cress | endoplasmic reticulum | 45.79 | 43.45 |
| AT5G23190.1 | Thale cress | endoplasmic reticulum | 45.98 | 42.93 |
| AT5G58860.1 | Thale cress | endoplasmic reticulum | 38.12 | 38.79 |
| AT1G34540.1 | Thale cress | endoplasmic reticulum | 36.78 | 38.55 |
| AT3G56630.1 | Thale cress | endoplasmic reticulum | 36.59 | 38.28 |
| AT1G63710.1 | Thale cress | endoplasmic reticulum, golgi | 37.55 | 37.48 |
| AT2G45970.1 | Thale cress | endoplasmic reticulum, golgi | 38.51 | 37.43 |
| AT2G27690.1 | Thale cress | endoplasmic reticulum | 34.67 | 36.57 |
| AT3G01900.1 | Thale cress | endoplasmic reticulum | 33.91 | 35.69 |
| AT4G00360.1 | Thale cress | endoplasmic reticulum | 37.74 | 35.62 |
| AT3G48520.1 | Thale cress | endoplasmic reticulum | 34.48 | 35.57 |
| AT1G01600.1 | Thale cress | endoplasmic reticulum | 37.74 | 35.56 |
| AT5G63450.2 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 35.44 | 32.57 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:839069 | ProteinID:AAF97964.1 | ProteinID:AEE30545.1 | ArrayExpress:AT1G24540 |
| EnsemblPlantsGene:AT1G24540 | RefSeq:AT1G24540 | TAIR:AT1G24540 | RefSeq:AT1G24540-TAIR-G | EnsemblPlants:AT1G24540.1 | TAIR:AT1G24540.1 |
| Unigene:At.41418 | Symbol:CYP86C1 | ncoils:Coil | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I |
| InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:IPR036396 | RefSeq:NP_173862.1 | PFAM:PF00067 | PO:PO:0001185 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009052 | PRINTS:PR00385 |
| PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24296 | PANTHER:PTHR24296:SF2 | UniProt:Q9FYL0 | SUPFAM:SSF48264 |
| UniParc:UPI00000A9A8B | SEG:seg | : | : | : | : |
Description
CYP86C1Cytochrome P450, family 86, subfamily C, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9FYL0]
Coordinates
chr1:+:8699650..8701458
Molecular Weight (calculated)
61059.3 Da
IEP (calculated)
9.386
GRAVY (calculated)
-0.257
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVLISAVVW VYTHLRLSDV ALALVGLFLL SYLREKLVSK GGPVMWPVLG IIPMLALNKH DLFTWCTRCV VRSGGTFHYR GIWFGGAYGI MTADPANVEH
101: ILKTNFKNYP KGAFYRERFR DLLEDGIFNA DDELWKEERR VAKTEMHSSR FLEHTFTTMR DLVDQKLVPL MENLSTSKRV FDLQDLLLRF TFDNICISAF
201: GVYPGSLETG LPEIPFAKAF EDATEYTLAR FLIPPFVWKP MRFLGIGYER KLNNAVRIVH AFANKTVRER RNKMRKLGNL NDYADLLSRL MQREYEKEED
301: TTRGNYFSDK YFREFCTSFI IAGRDTTSVA LVWFFWLVQK HPEVEKRILR EIREIKRKLT TQETEDQFEA EDFREMVYLQ AALTESLRLY PSVPMEMKQA
401: LEDDVLPDGT RVKKGARIHY SVYSMGRIES IWGKDWEEFK PERWIKEGRI VSEDQFKYVV FNGGPRLCVG KKFAYTQMKM VAAAILMRYS VKVVQGQEIV
501: PKLTTTLYMK NGMNVMLQPR DW
101: ILKTNFKNYP KGAFYRERFR DLLEDGIFNA DDELWKEERR VAKTEMHSSR FLEHTFTTMR DLVDQKLVPL MENLSTSKRV FDLQDLLLRF TFDNICISAF
201: GVYPGSLETG LPEIPFAKAF EDATEYTLAR FLIPPFVWKP MRFLGIGYER KLNNAVRIVH AFANKTVRER RNKMRKLGNL NDYADLLSRL MQREYEKEED
301: TTRGNYFSDK YFREFCTSFI IAGRDTTSVA LVWFFWLVQK HPEVEKRILR EIREIKRKLT TQETEDQFEA EDFREMVYLQ AALTESLRLY PSVPMEMKQA
401: LEDDVLPDGT RVKKGARIHY SVYSMGRIES IWGKDWEEFK PERWIKEGRI VSEDQFKYVV FNGGPRLCVG KKFAYTQMKM VAAAILMRYS VKVVQGQEIV
501: PKLTTTLYMK NGMNVMLQPR DW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.