Factsheet for TraesCS6B01G239400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	endoplasmic reticulum, mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G193600.1	Wheat	golgi	91.27	97.29
HORVU6Hr1G053810.2	Barley	endoplasmic reticulum	89.64	93.73
TraesCS6A01G210500.1	Wheat	mitochondrion	83.27	88.76
Zm00001d050977_P001	Maize	mitochondrion	72.0	74.16
Os02t0596300-01	Rice	cytosol, peroxisome	65.27	73.87
EES07097	Sorghum	golgi	71.64	73.51
AT1G24540.1	Thale cress	endoplasmic reticulum, golgi	49.27	51.92
CDX84956	Canola	endoplasmic reticulum	47.09	51.39
Bra032794.1-P	Field mustard	cytosol	43.82	51.39
VIT_03s0017g01070.t01	Wine grape	endoplasmic reticulum, golgi	46.18	51.0
GSMUA_Achr10P...	Banana	golgi, mitochondrion	46.91	50.79
CDY27586	Canola	endoplasmic reticulum	46.55	50.39
VIT_01s0137g00410.t01	Wine grape	endoplasmic reticulum, extracellular	50.55	49.64
CDY19394	Canola	endoplasmic reticulum, golgi	44.18	46.11
Bra019812.1-P	Field mustard	endoplasmic reticulum	44.18	46.11
CDX98008	Canola	endoplasmic reticulum	44.18	45.51
CDY21086	Canola	endoplasmic reticulum, golgi	34.18	45.19
Bra016739.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	39.82	44.97
AT1G13140.1	Thale cress	endoplasmic reticulum	43.27	44.57
CDY34587	Canola	endoplasmic reticulum, golgi, plasma membrane	41.09	43.88
AT3G26125.1	Thale cress	endoplasmic reticulum	42.91	43.62
AT1G13150.1	Thale cress	endoplasmic reticulum	41.82	43.48
TraesCS1B01G177900.1	Wheat	peroxisome, plastid	43.27	43.27
Bra017333.1-P	Field mustard	endoplasmic reticulum	41.64	42.72
CDY04194	Canola	endoplasmic reticulum	41.64	42.72
CDY39170	Canola	endoplasmic reticulum	41.64	42.72
TraesCS4B01G241100.1	Wheat	endoplasmic reticulum	38.73	40.73
TraesCS5B01G136100.1	Wheat	endoplasmic reticulum	37.45	40.63
TraesCS2B01G425400.1	Wheat	golgi	38.91	40.07
TraesCS6B01G279400.1	Wheat	endoplasmic reticulum	39.27	39.93
TraesCS3B01G362200.1	Wheat	endoplasmic reticulum, golgi	35.45	38.01
TraesCS3B01G546300.1	Wheat	endoplasmic reticulum	36.73	37.83
TraesCS3B01G362400.1	Wheat	endoplasmic reticulum	35.09	37.77
TraesCS4B01G135200.1	Wheat	endoplasmic reticulum	34.91	37.72
TraesCS3B01G403400.1	Wheat	peroxisome, plasma membrane, plastid	36.0	37.57
TraesCS4B01G241300.1	Wheat	endoplasmic reticulum, golgi	24.73	36.86
TraesCS5B01G128100.1	Wheat	endoplasmic reticulum, vacuole	34.0	36.81
TraesCS1B01G286300.1	Wheat	endoplasmic reticulum, plasma membrane	34.91	36.64
TraesCS3B01G399900.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	36.0	36.0
TraesCS2B01G563200.1	Wheat	extracellular, plasma membrane	33.09	35.76
TraesCS1B01G371900.1	Wheat	plastid	35.27	35.08
TraesCS2B01G563300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	32.36	34.36
TraesCS1B01G251600.1	Wheat	golgi, peroxisome, plastid	34.18	33.39

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PFscan:PS51257	PANTHER:PTHR24296	PANTHER:PTHR24296:SF2	SUPFAM:SSF48264
EnsemblPlantsGene:TraesCS6B01G239400	EnsemblPlants:TraesCS6B01G239400.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6B:-:416100287..416102021

Molecular Weight (calculated)

61089.5 Da

IEP (calculated)

8.592

GRAVY (calculated)

-0.074

Length

550 amino acids

Sequence
(BLAST)

001: MAGRTFVDAA VRAMQEYVRV SDLALAAAVL FACNAATTRL KSRGRPMLWP VFGIIPTLFA HLDNIYDWGA AALARSGGTF PYRGMWGGGS SGVITSVPAN
101: VEHVLKTNFS NYPKGPYYRE RFVELLGDGI FNADGEAWRA QRRAATAEMH SAQFLEFSAR TVEQLVHGRL MPLLQQQQSQ GGVTVDLQDV LLRFTFDNIC
201: AAAFGVDAGC LADGLPDVPF ARAFERATEL SLARFVTPPF VWKAKRLLCV GGERRLAEAA RSVREFAERT VSERRTELRK LGSLQGRCDL LSRLMSSSTG
301: HSDEFLRDFC ISFILAGRDT SSVALVWFFW LLASHPEAES RVLDDVRAAH GDVGKMDYLH AALTESMRLY PPVPVDFKEA LQDDVLPDGT AIRARQRVIY
401: NTYAIGRDPA AWGEDCLEFR PERWMKGRDF AGGAESPFKY VVFNGGPRLC VGKRFAYTQM KTLAAAVLET FAVEVAPGQV VKPKLNTTLY MKNGLMVSFR
501: RREQQHVHCT TVAEFIFLIL GWNSARMMEI SSCPALNRSK LKGTECGTDL

Best Arabidopsis Sequence Match ( AT1G24540.1 )
(BLAST)

001: MNVLISAVVW VYTHLRLSDV ALALVGLFLL SYLREKLVSK GGPVMWPVLG IIPMLALNKH DLFTWCTRCV VRSGGTFHYR GIWFGGAYGI MTADPANVEH
101: ILKTNFKNYP KGAFYRERFR DLLEDGIFNA DDELWKEERR VAKTEMHSSR FLEHTFTTMR DLVDQKLVPL MENLSTSKRV FDLQDLLLRF TFDNICISAF
201: GVYPGSLETG LPEIPFAKAF EDATEYTLAR FLIPPFVWKP MRFLGIGYER KLNNAVRIVH AFANKTVRER RNKMRKLGNL NDYADLLSRL MQREYEKEED
301: TTRGNYFSDK YFREFCTSFI IAGRDTTSVA LVWFFWLVQK HPEVEKRILR EIREIKRKLT TQETEDQFEA EDFREMVYLQ AALTESLRLY PSVPMEMKQA
401: LEDDVLPDGT RVKKGARIHY SVYSMGRIES IWGKDWEEFK PERWIKEGRI VSEDQFKYVV FNGGPRLCVG KKFAYTQMKM VAAAILMRYS VKVVQGQEIV
501: PKLTTTLYMK NGMNVMLQPR DW

Arabidopsis Description

CYP86C1Cytochrome P450, family 86, subfamily C, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9FYL0]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.