Factsheet for TraesCS3B01G546300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G108150.1	Barley	endoplasmic reticulum	89.33	89.33
Os01t0951500-01	Rice	plasma membrane	74.34	72.71
Zm00001d042087_P001	Maize	endoplasmic reticulum	72.1	72.23
EES04227	Sorghum	endoplasmic reticulum, extracellular	72.47	71.8
TraesCS1B01G251600.1	Wheat	golgi, peroxisome, plastid	59.93	56.84
GSMUA_Achr8P29580_001	Banana	endoplasmic reticulum, plasma membrane	49.06	50.19
VIT_06s0009g03630.t01	Wine grape	endoplasmic reticulum, plasma membrane	45.69	46.21
TraesCS4B01G241100.1	Wheat	endoplasmic reticulum	42.51	43.4
TraesCS3B01G362400.1	Wheat	endoplasmic reticulum	41.01	42.86
TraesCS5B01G136100.1	Wheat	endoplasmic reticulum	40.26	42.41
TraesCS3B01G362200.1	Wheat	endoplasmic reticulum, golgi	39.14	40.74
TraesCS4B01G135200.1	Wheat	endoplasmic reticulum	37.45	39.29
TraesCS4B01G241300.1	Wheat	endoplasmic reticulum, golgi	26.97	39.02
TraesCS3B01G403400.1	Wheat	peroxisome, plasma membrane, plastid	37.64	38.14
TraesCS1B01G286300.1	Wheat	endoplasmic reticulum, plasma membrane	36.33	37.02
TraesCS1B01G371900.1	Wheat	plastid	38.2	36.89
TraesCS6B01G239400.1	Wheat	mitochondrion	37.83	36.73
TraesCS5B01G128100.1	Wheat	endoplasmic reticulum, vacuole	34.46	36.22
TraesCS2B01G563200.1	Wheat	extracellular, plasma membrane	34.08	35.76
TraesCS2B01G563300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	33.52	34.56
TraesCS3B01G399900.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	35.02	34.0
TraesCS1B01G177900.1	Wheat	peroxisome, plastid	35.02	34.0
TraesCS2B01G425400.1	Wheat	golgi	33.15	33.15
TraesCS6B01G279400.1	Wheat	endoplasmic reticulum	32.77	32.35

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705
GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
PANTHER:PTHR24296	PANTHER:PTHR24296:SF27	SUPFAM:SSF48264	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G546300
EnsemblPlants:TraesCS3B01G546300.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:783004054..783005658

Molecular Weight (calculated)

59288.2 Da

IEP (calculated)

8.689

GRAVY (calculated)

-0.136

Length

534 amino acids

Sequence
(BLAST)

001: MDDGSIALLL LLLPVLLAVY LRRRRVPPAA ASANHCPHPN RVLGNTVPLL RNLHRFLDWA TDQLAESPAS TIEVRGPLGL GSGVATARPE AVDHLLRANF
101: PNYVKGARFA VPFADLLGRG IFLADGRLWS LQRKVASYSF SSRSLRRFSG RVLREHLHCR LLPLLDASAG SGVALDLQDV LRRFSFDNIC GVAFGVESST
201: LLELEAGDRR SRRHEAFFAA FDDAVEISFA RILHPTTLLW RAMRLANVGS ERRMREAIGV IDEYVMGMLE AEQPSSPAED GEHEQHLLSR FASALDAEST
301: AAAGRELGEL FGSPDAKRRF LRDVVVSFVL AGKDSTSSAL TWFFWLLAAN PRCERRVHEE VTRTAHGDDA GEYEGLKGMH YLHAALTEAM RLYPPVPINT
401: RVAAAADVLP DGTTVRAGWF ADYSAYAMGR MPRLWGDDCR EFRPERWLGG DRGEFVVADA ARYPVFHAGP RASLGKEMAY VQMKAVAAAV IRRFTMEMVE
501: TPASMDAPPR YELGATLRIK GGLRVRIRRR EDHF

Best Arabidopsis Sequence Match ( AT1G34540.1 )
(BLAST)

001: MALLIFIFLL CFPISIFFIF FTKKSSSEFG FKSYPIVGSF PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKQQLIMTA NPSNVEYMLK TKFESFPKGQ
101: QFTSVLEDFL GHGIFNSDGD MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLVE AATTGKLIDL QDILERFAFD NICKLAFNVD CACLGHDGAV
201: GVNFMRAFET AATIISQRFR SVASCAWRIK KKLNIGSERV LRESIATVHK FADEIVRNRI DQGRSSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV EDKILQELNS IRARTGKRIG EVYGFEHLKM MNYLHAAITE SLRLYPPVPV DIKSCAEDNV LPDGTFVGKG WAITYNIFAM
401: GRMESIWGKD CDRFDPERWI DETNGCFRGE DPSKFPAFHA GPRMCVGKDM AYIQMKSIVA AVLERFVVEV PGKERPEILL SMTLRIKGGL FARVQERS

Arabidopsis Description

CYP94D1CYP94D1 [Source:UniProtKB/TrEMBL;Acc:A0A178WEM5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.