Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G563200.1 | Wheat | extracellular, plasma membrane | 93.44 | 95.09 |
| TraesCS2D01G535700.1 | Wheat | extracellular, plasma membrane | 91.89 | 94.44 |
| TraesCS2D01G535800.1 | Wheat | mitochondrion | 74.13 | 93.89 |
| HORVU2Hr1G117140.3 | Barley | endoplasmic reticulum | 90.73 | 92.89 |
| HORVU2Hr1G117080.3 | Barley | endoplasmic reticulum, extracellular | 90.73 | 92.89 |
| TraesCS2A01G533700.1 | Wheat | extracellular, plasma membrane | 90.54 | 92.69 |
| HORVU2Hr1G117150.1 | Barley | endoplasmic reticulum, plasma membrane | 90.73 | 92.34 |
| TraesCS5B01G128100.1 | Wheat | endoplasmic reticulum, vacuole | 88.03 | 89.76 |
| Os12t0150200-01 | Rice | endoplasmic reticulum | 77.03 | 78.39 |
| EES16641 | Sorghum | endoplasmic reticulum | 76.06 | 77.41 |
| TraesCS4B01G135200.1 | Wheat | endoplasmic reticulum | 74.9 | 76.23 |
| Os11t0151400-01 | Rice | endoplasmic reticulum, golgi, plastid | 76.45 | 76.15 |
| Zm00001d023413_P001 | Maize | endoplasmic reticulum, extracellular | 71.81 | 75.76 |
| Zm00001d044703_P001 | Maize | endoplasmic reticulum, extracellular | 72.59 | 75.5 |
| Zm00001d023400_P002 | Maize | endoplasmic reticulum | 74.13 | 75.44 |
| OQU82886 | Sorghum | endoplasmic reticulum, plasma membrane | 73.94 | 75.25 |
| Zm00001d052530_P001 | Maize | endoplasmic reticulum, golgi | 57.72 | 73.83 |
| GSMUA_Achr6P07480_001 | Banana | extracellular, golgi | 47.88 | 65.78 |
| GSMUA_Achr5P16800_001 | Banana | extracellular, golgi | 53.86 | 64.73 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 47.88 | 63.27 |
| GSMUA_Achr8P29660_001 | Banana | endoplasmic reticulum, plasma membrane | 48.46 | 58.51 |
| VIT_06s0080g00090.t01 | Wine grape | cytosol | 49.61 | 57.75 |
| VIT_13s0074g00790.t01 | Wine grape | cytosol | 51.74 | 57.14 |
| KRH25192 | Soybean | plastid | 53.67 | 55.38 |
| KRH30469 | Soybean | plastid | 53.86 | 55.14 |
| Solyc06g074420.1.1 | Tomato | endoplasmic reticulum | 50.77 | 54.23 |
| TraesCS1B01G286300.1 | Wheat | endoplasmic reticulum, plasma membrane | 54.83 | 54.2 |
| PGSC0003DMT400023141 | Potato | endoplasmic reticulum, plasma membrane | 51.35 | 53.63 |
| AT2G27690.1 | Thale cress | endoplasmic reticulum | 51.16 | 53.54 |
| PGSC0003DMT400018331 | Potato | endoplasmic reticulum | 50.39 | 53.37 |
| TraesCS3B01G403400.1 | Wheat | peroxisome, plasma membrane, plastid | 54.25 | 53.32 |
| CDY04506 | Canola | endoplasmic reticulum, extracellular | 50.58 | 53.25 |
| CDX71432 | Canola | endoplasmic reticulum, extracellular | 50.58 | 53.14 |
| PGSC0003DMT400022922 | Potato | cytosol | 37.64 | 52.99 |
| Bra012006.1-P | Field mustard | endoplasmic reticulum, extracellular | 50.77 | 52.92 |
| Solyc10g083400.1.1 | Tomato | endoplasmic reticulum | 50.19 | 52.31 |
| PGSC0003DMT400050139 | Potato | endoplasmic reticulum, plasma membrane | 49.42 | 50.29 |
| KRH30881 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 50.58 | 50.19 |
| VIT_08s0007g03660.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 52.51 | 49.54 |
| KRH67891 | Soybean | endoplasmic reticulum, plasma membrane | 49.81 | 47.78 |
| TraesCS5B01G136100.1 | Wheat | endoplasmic reticulum | 36.68 | 37.48 |
| TraesCS4B01G241100.1 | Wheat | endoplasmic reticulum | 37.45 | 37.09 |
| TraesCS1B01G371900.1 | Wheat | plastid | 39.58 | 37.07 |
| TraesCS3B01G362200.1 | Wheat | endoplasmic reticulum, golgi | 34.17 | 34.5 |
| TraesCS3B01G362400.1 | Wheat | endoplasmic reticulum | 33.78 | 34.25 |
| TraesCS4B01G241300.1 | Wheat | endoplasmic reticulum, golgi | 23.94 | 33.6 |
| TraesCS3B01G546300.1 | Wheat | endoplasmic reticulum | 34.56 | 33.52 |
| TraesCS1B01G177900.1 | Wheat | peroxisome, plastid | 34.94 | 32.91 |
| TraesCS6B01G279400.1 | Wheat | endoplasmic reticulum | 34.17 | 32.72 |
| TraesCS3B01G399900.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 34.56 | 32.55 |
| TraesCS2B01G425400.1 | Wheat | golgi | 33.4 | 32.4 |
| TraesCS6B01G239400.1 | Wheat | mitochondrion | 34.36 | 32.36 |
| TraesCS1B01G251600.1 | Wheat | golgi, peroxisome, plastid | 34.75 | 31.97 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G563300.1 | EnsemblPlantsGene:TraesCS2B01G563300 | Gene3D:1.10.630.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0055114 |
| InterPro:Cyt_P450 | InterPro:Cyt_P450_sf | InterPro:IPR036396 | PANTHER:PTHR24296 | PANTHER:PTHR24296:SF30 | PFAM:PF00067 |
| SEG:seg | SUPFAM:SSF48264 | TMHMM:TMhelix | MapMan:11.7.3.3 | : | : |
Description
No Description!
Coordinates
chr2B:+:755054555..755056586
Molecular Weight (calculated)
57075.1 Da
IEP (calculated)
8.394
GRAVY (calculated)
0.058
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSKREQM DDAVGLSWEA RCAGLAFFSL SIFLVALTAV LLLVRRWPNP WCGCHVCRAY LTGSWAKDFT NLADWYAHLL RESPTGTVHF HVLGCTVTAN
101: PANVEYMLKT RFDNFPKGKR FAALLGDLLG GGIFNVDGDA WRHQRKMASL ELGSVTVRSY AYKIVAQEVE ARLLPVLADA ADKGKVIDLQ DVFRRFAFDT
201: VCKISFGLDP GCLDLDMPMS DLANAFDTAS RLCAMRGAAA SPLVWKMKRM LNIGSERELK KAIKLVDDLA SAMILQRRSL GFDNSHDLLS RFMASDVAMD
301: DKYLRNIVVS FLLAGRDTVA SKSTSLFIHL HKNPEVAAAI RGEAGSDKPS TYEHLMSLQY THAVLFENMR LFPPVQFDSK FCAAADVLPD GTYVEGESRV
401: MYHPYAMGRM PSIWGADYEA FRPDRWLTGP GGSFAPASLY KYPVFQAVLR VCLGKELAIT EMKAVGVAVV RAFDVEVVGE NGRSGWAPTF VPGLTASISG
501: GLPVRIIKRT LTPNSGFT
101: PANVEYMLKT RFDNFPKGKR FAALLGDLLG GGIFNVDGDA WRHQRKMASL ELGSVTVRSY AYKIVAQEVE ARLLPVLADA ADKGKVIDLQ DVFRRFAFDT
201: VCKISFGLDP GCLDLDMPMS DLANAFDTAS RLCAMRGAAA SPLVWKMKRM LNIGSERELK KAIKLVDDLA SAMILQRRSL GFDNSHDLLS RFMASDVAMD
301: DKYLRNIVVS FLLAGRDTVA SKSTSLFIHL HKNPEVAAAI RGEAGSDKPS TYEHLMSLQY THAVLFENMR LFPPVQFDSK FCAAADVLPD GTYVEGESRV
401: MYHPYAMGRM PSIWGADYEA FRPDRWLTGP GGSFAPASLY KYPVFQAVLR VCLGKELAIT EMKAVGVAVV RAFDVEVVGE NGRSGWAPTF VPGLTASISG
501: GLPVRIIKRT LTPNSGFT
001: MLLIISFTIV SFFFIIIFSL FHLLFLQKLR YCNCEICHAY LTSSWKKDFI NLSDWYTHLL RRSPTSTIKV HVLNSVITAN PSNVEHILKT NFHNYPKGKQ
101: FSVILGDLLG RGIFNSDGDT WRFQRKLASL ELGSVSVRVF AHEIVKTEIE TRLLPILTSF SDNPGSVLDL QDVFRRFSFD TISKLSFGFD PDCLRLPFPI
201: SEFAVAFDTA SLLSAKRALA PFPLLWKTKR LLRIGSEKKL QESINVINRL AGDLIKQRRL TGLMGKNDLI SRFMAVVAED DDEYLRDIVV SFLLAGRDTV
301: AAGLTGFFWL LTRHPEVENR IREELDRVMG TGFDSVTARC DEMREMDYLH ASLYESMRLF PPVQFDSKFA LNDDVLSDGT FVNSGTRVTY HAYAMGRMDR
401: IWGPDYEEFK PERWLDNEGK FRPENPVKYP VFQAGARVCI GKEMAIMEMK SIAVAIIRRF ETRVASPETT ETLRFAPGLT ATVNGGLPVM IQERS
101: FSVILGDLLG RGIFNSDGDT WRFQRKLASL ELGSVSVRVF AHEIVKTEIE TRLLPILTSF SDNPGSVLDL QDVFRRFSFD TISKLSFGFD PDCLRLPFPI
201: SEFAVAFDTA SLLSAKRALA PFPLLWKTKR LLRIGSEKKL QESINVINRL AGDLIKQRRL TGLMGKNDLI SRFMAVVAED DDEYLRDIVV SFLLAGRDTV
301: AAGLTGFFWL LTRHPEVENR IREELDRVMG TGFDSVTARC DEMREMDYLH ASLYESMRLF PPVQFDSKFA LNDDVLSDGT FVNSGTRVTY HAYAMGRMDR
401: IWGPDYEEFK PERWLDNEGK FRPENPVKYP VFQAGARVCI GKEMAIMEMK SIAVAIIRRF ETRVASPETT ETLRFAPGLT ATVNGGLPVM IQERS
Arabidopsis Description
CYP94C1Cytochrome P450 94C1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX1]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.