Factsheet for TraesCS3B01G399900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G368200.1	Wheat	plastid	98.0	98.36
TraesCS3D01G361200.1	Wheat	plastid	96.91	98.34
HORVU3Hr1G085020.1	Barley	endoplasmic reticulum, plasma membrane	96.91	96.73
Os01t0854800-01	Rice	plasma membrane	90.36	91.19
OQU87885	Sorghum	plastid	88.73	89.21
Zm00001d042814_P001	Maize	endoplasmic reticulum, plasma membrane	88.0	88.48
Zm00001d012326_P001	Maize	endoplasmic reticulum, golgi	87.64	87.96
GSMUA_Achr6P33790_001	Banana	vacuole	66.55	74.09
VIT_06s0004g06210.t01	Wine grape	endoplasmic reticulum	67.64	71.68
CDY61020	Canola	endoplasmic reticulum, extracellular	63.09	70.53
AT5G58860.1	Thale cress	endoplasmic reticulum	65.64	70.37
CDY70784	Canola	cytosol	12.91	70.3
CDX71150	Canola	endoplasmic reticulum, extracellular	62.55	70.06
Bra006743.1-P	Field mustard	endoplasmic reticulum, extracellular	64.73	69.26
Solyc06g076800.2.1	Tomato	endoplasmic reticulum	64.73	68.33
PGSC0003DMT400078030	Potato	endoplasmic reticulum	64.73	68.33
CDY02846	Canola	endoplasmic reticulum, golgi	47.82	68.31
KRH17019	Soybean	endoplasmic reticulum, golgi	66.91	68.15
KRH30323	Soybean	endoplasmic reticulum, golgi	63.64	67.18
CDY32676	Canola	endoplasmic reticulum	48.36	66.83
TraesCS2B01G425400.1	Wheat	golgi	61.45	63.3
TraesCS6B01G279400.1	Wheat	endoplasmic reticulum	61.82	62.85
PGSC0003DMT400072790	Potato	cytosol	40.18	46.62
TraesCS1B01G177900.1	Wheat	peroxisome, plastid	44.55	44.55
TraesCS5B01G136100.1	Wheat	endoplasmic reticulum	38.36	41.62
TraesCS4B01G241100.1	Wheat	endoplasmic reticulum	38.0	39.96
TraesCS3B01G362400.1	Wheat	endoplasmic reticulum	36.18	38.94
TraesCS4B01G135200.1	Wheat	endoplasmic reticulum	34.73	37.52
TraesCS3B01G362200.1	Wheat	endoplasmic reticulum, golgi	34.0	36.45
TraesCS4B01G241300.1	Wheat	endoplasmic reticulum, golgi	24.36	36.31
TraesCS5B01G128100.1	Wheat	endoplasmic reticulum, vacuole	33.45	36.22
TraesCS3B01G403400.1	Wheat	peroxisome, plasma membrane, plastid	34.55	36.05
TraesCS6B01G239400.1	Wheat	mitochondrion	36.0	36.0
TraesCS2B01G563200.1	Wheat	extracellular, plasma membrane	33.27	35.95
TraesCS1B01G371900.1	Wheat	plastid	35.45	35.26
TraesCS3B01G546300.1	Wheat	endoplasmic reticulum	34.0	35.02
TraesCS1B01G286300.1	Wheat	endoplasmic reticulum, plasma membrane	33.27	34.92
TraesCS2B01G563300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	32.55	34.56
TraesCS1B01G251600.1	Wheat	golgi, peroxisome, plastid	32.91	32.15

Protein Annotations

Gene3D:1.10.630.10	MapMan:21.9.1.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010345	GO:GO:0016705	GO:GO:0018685
GO:GO:0019748	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF26	SUPFAM:SSF48264	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3B01G399900	EnsemblPlants:TraesCS3B01G399900.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:631048244..631049896

Molecular Weight (calculated)

61526.3 Da

IEP (calculated)

8.345

GRAVY (calculated)

-0.075

Length

550 amino acids

Sequence
(BLAST)

001: MATAMYDSVL HLQLHPGAIA VTVVALASAY MVWFWALSRR LSGPPMWPLV GSLPSVVMNR KRVHDWIADN LRATGEAATY QTCILPLPFL ARRQGLVTVT
101: CNPRNLEHIL RARFDNYPKG PMWQAAFHDL LGQGIFNSDG ETWLLQRKTA ALEFTTRTLR QAMARWANRS IKDRLWRILA DHCDAAASVD LQDLLLRLTF
201: DNICGLTFGK DPETLSPGLT ENPFANAFDE ATLATMQRFL FPSFLWRIKK ALGIGSEQSL RKSLAVVDQF MTETIAARKA TPSDDLLSRF MKKRDSNGKA
301: FPEDVLQWIA LNFLLAGRDT SSVALSWFFW TIMQRPDVER KVLLEIASVL RETRGDDTGR WAEEPLDFDE LDRLVYLKAA LSETLRLYPS VPQDSKYVVA
401: DDVLPDGTVV PAGSAITYSI YSVGRMESIW GKDCVEFRPE RWLSADGSRF EPVKDAYRFV AFNGGPRTCL GKDLAYLQMK SIASAVLLRH SVELVPGHQV
501: EQKMSLTLFM KNGLRVNVKP RDLAGYVAPP PEEAPPLGSV VIPTTTAAAA

Best Arabidopsis Sequence Match ( AT5G58860.1 )
(BLAST)

001: MEALNSILTG YAVAALSVYA LWFYFLSRRL TGPKVLPFVG SLPYLIANRS RIHDWIADNL RATGGTYQTC TMVIPFVAKA QGFYTVTCHP KNVEHILKTR
101: FDNYPKGPMW RAAFHDLLGQ GIFNSDGDTW LMQRKTAALE FTTRTLRQAM ARWVNGTIKN RLWLILDRAV QNNKPVDLQD LFLRLTFDNI CGLTFGKDPE
201: TLSLDLPDNP FSVAFDTATE ATLKRLLYTG FLWRIQKAMG IGSEDKLKKS LEVVETYMND AIDARKNSPS DDLLSRFLKK RDVNGNVLPT DVLQRIALNF
301: VLAGRDTSSV ALSWFFWLVM NNREVETKIV NELSMVLKET RGNDQEKWTE EPLEFDEADR LVYLKAALAE TLRLYPSVPQ DFKYVVDDDV LPDGTFVPRG
401: STVTYSIYSI GRMKTIWGED CLEFRPERWL TADGERFETP KDGYKFVAFN AGPRTCLGKD LAYNQMKSVA SAVLLRYRVF PVPGHRVEQK MSLTLFMKNG
501: LRVYLQPRGE VLA

Arabidopsis Description

CYP86A1Cytochrome P450 86A1 [Source:UniProtKB/Swiss-Prot;Acc:P48422]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.