Factsheet for VIT_06s0004g06210.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
plastid 2
extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g076800.2.1	Tomato	endoplasmic reticulum	79.58	79.27
PGSC0003DMT400078030	Potato	endoplasmic reticulum	79.38	79.08
AT5G58860.1	Thale cress	endoplasmic reticulum	77.46	78.36
CDY61020	Canola	endoplasmic reticulum, extracellular	74.18	78.25
CDX71150	Canola	endoplasmic reticulum, extracellular	73.41	77.6
Bra006743.1-P	Field mustard	endoplasmic reticulum, extracellular	75.53	76.26
CDY02846	Canola	endoplasmic reticulum, golgi	55.49	74.81
KRH30323	Soybean	endoplasmic reticulum, golgi	74.57	74.28
KRH17019	Soybean	endoplasmic reticulum, golgi	77.07	74.07
CDY32676	Canola	endoplasmic reticulum	56.07	73.12
TraesCS3D01G361200.1	Wheat	plastid	70.71	67.71
TraesCS3B01G399900.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	71.68	67.64
TraesCS3A01G368200.1	Wheat	plastid	71.1	67.34
Zm00001d042814_P001	Maize	endoplasmic reticulum, plasma membrane	70.91	67.28
OQU87885	Sorghum	plastid	70.71	67.09
Os01t0854800-01	Rice	plasma membrane	70.33	66.97
Zm00001d012326_P001	Maize	endoplasmic reticulum, golgi	70.71	66.97
HORVU3Hr1G085020.1	Barley	endoplasmic reticulum, plasma membrane	71.1	66.97
GSMUA_Achr6P33790_001	Banana	vacuole	63.2	66.4
VIT_02s0025g03320.t01	Wine grape	endoplasmic reticulum, golgi	66.28	63.47
VIT_15s0046g02380.t01	Wine grape	endoplasmic reticulum, golgi	64.55	59.19
VIT_03s0017g01070.t01	Wine grape	endoplasmic reticulum, golgi	39.88	41.57
VIT_01s0011g02060.t01	Wine grape	endoplasmic reticulum, golgi, plastid	42.77	40.73
VIT_08s0040g00820.t01	Wine grape	endoplasmic reticulum	38.73	40.2
VIT_13s0074g00790.t01	Wine grape	cytosol	34.87	38.59
VIT_06s0080g00090.t01	Wine grape	cytosol	32.76	38.2
VIT_01s0137g00410.t01	Wine grape	endoplasmic reticulum, extracellular	40.66	37.68
VIT_07s0141g00920.t01	Wine grape	endoplasmic reticulum, plasma membrane	35.84	36.76
VIT_07s0141g00890.t01	Wine grape	endoplasmic reticulum, plasma membrane	34.87	35.84
VIT_06s0009g03630.t01	Wine grape	endoplasmic reticulum, plasma membrane	36.42	35.8
VIT_17s0000g01490.t01	Wine grape	endoplasmic reticulum, golgi	32.37	32.81
VIT_14s0068g02120.t01	Wine grape	endoplasmic reticulum, plastid	33.53	32.46
VIT_08s0007g03660.t01	Wine grape	endoplasmic reticulum, plasma membrane	33.53	31.69

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100243236	wikigene:100243236	MapMan:21.9.1.1	ProteinID:CBI15990	ProteinID:CBI15990.3
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:D7SK14	EMBL:FN594951
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006629	GO:GO:0006631
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010345	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0016705	GO:GO:0018685	GO:GO:0019748	GO:GO:0020037
GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100243236	wikigene:LOC100243236	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF26	SUPFAM:SSF48264
TMHMM:TMhelix	UniParc:UPI00019836AC	ArrayExpress:VIT_06s0004g06210	EnsemblPlantsGene:VIT_06s0004g06210	EnsemblPlants:VIT_06s0004g06210.t01	unigene:Vvi.22085
RefSeq:XP_002280004	RefSeq:XP_002280004.2	RefSeq:XP_010650931.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:+:7005633..7007477

Molecular Weight (calculated)

59324.7 Da

IEP (calculated)

9.634

GRAVY (calculated)

-0.227

Length

519 amino acids

Sequence
(BLAST)

001: METPSIVFFV VAAASAYVLW FYLLARKLTG PKMWPVVGSL PALFMNRRRI HDWISGNLRE TGGAATYQTC TLALPFLAYK QGFYTVTCHP KNIEHILRTR
101: FDNYPKGPTW QTAFHDLLGQ GIFNSDGDTW LIQRKTAALE FTTRTLRQAM SRWVNRTIKM RLWRILEKAA SEKSSVDMQD LLLRLTFDNI CGLTFGKDPE
201: TLSPDFPENP FSMAFDSATE STLQRLLYPG FLWRLKKFLR IGAERRLKQS LRVVENYMDD AVAARKERPS DDLLSRFMKK RDVDGNVFPT SVLQRIALNF
301: VLAGRDTSSV ALSWFFWLIM NNPRVEEKIT TELSTVLRET RGDDQTKWLE EPLVFDEADR LIYLKAALAE TLRLYPSVPE DFKYVVSDDI LPDGTYVPAG
401: TTVTYSIYSV GRMKTIWGED CLEFKPERWL STGGDRFEPP KDGYKFVAFN AGPRTCLGKD LAYLQMKSVA SAVLLRYRLS PVPGHRVEQK MSLTLFMKNG
501: LRVYLHPRGL EPPGAATSA

Best Arabidopsis Sequence Match ( AT5G58860.1 )
(BLAST)

001: MEALNSILTG YAVAALSVYA LWFYFLSRRL TGPKVLPFVG SLPYLIANRS RIHDWIADNL RATGGTYQTC TMVIPFVAKA QGFYTVTCHP KNVEHILKTR
101: FDNYPKGPMW RAAFHDLLGQ GIFNSDGDTW LMQRKTAALE FTTRTLRQAM ARWVNGTIKN RLWLILDRAV QNNKPVDLQD LFLRLTFDNI CGLTFGKDPE
201: TLSLDLPDNP FSVAFDTATE ATLKRLLYTG FLWRIQKAMG IGSEDKLKKS LEVVETYMND AIDARKNSPS DDLLSRFLKK RDVNGNVLPT DVLQRIALNF
301: VLAGRDTSSV ALSWFFWLVM NNREVETKIV NELSMVLKET RGNDQEKWTE EPLEFDEADR LVYLKAALAE TLRLYPSVPQ DFKYVVDDDV LPDGTFVPRG
401: STVTYSIYSI GRMKTIWGED CLEFRPERWL TADGERFETP KDGYKFVAFN AGPRTCLGKD LAYNQMKSVA SAVLLRYRVF PVPGHRVEQK MSLTLFMKNG
501: LRVYLQPRGE VLA

Arabidopsis Description

CYP86A1Cytochrome P450 86A1 [Source:UniProtKB/Swiss-Prot;Acc:P48422]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.