Factsheet for TraesCS3D01G325600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

endoplasmic reticulum 5
plasma membrane 3
vacuole 3
golgi 3
extracellular 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G332100.1	Wheat	endoplasmic reticulum	88.81	92.79
HORVU3Hr1G078810.1	Barley	endoplasmic reticulum, golgi	88.62	90.65
TraesCS3D01G325700.1	Wheat	endoplasmic reticulum	74.07	73.25
TraesCS3D01G325500.1	Wheat	endoplasmic reticulum	68.84	71.93
TraesCS2D01G007600.1	Wheat	mitochondrion	62.5	64.55
KRH66690	Soybean	endoplasmic reticulum	49.63	54.06
Bra003246.1-P	Field mustard	cytosol	41.42	52.48
TraesCS5D01G006800.1	Wheat	endoplasmic reticulum, golgi	48.88	51.57
AT1G34540.1	Thale cress	endoplasmic reticulum	47.76	51.41
TraesCS5D01G154600.1	Wheat	endoplasmic reticulum	48.51	50.98
TraesCS2D01G589200.1	Wheat	endoplasmic reticulum	49.07	50.58
AT3G56630.1	Thale cress	endoplasmic reticulum	47.01	50.5
TraesCS4D01G240800.1	Wheat	endoplasmic reticulum, golgi	49.44	50.19
CDX67652	Canola	endoplasmic reticulum	46.64	50.0
CDY32022	Canola	endoplasmic reticulum	46.27	49.7
Bra007259.1-P	Field mustard	endoplasmic reticulum	45.34	49.29
TraesCS4D01G240900.1	Wheat	endoplasmic reticulum	48.13	49.24
VIT_08s0040g00820.t01	Wine grape	endoplasmic reticulum	45.9	49.2
CDY32023	Canola	endoplasmic reticulum	45.71	49.0
CDY56777	Canola	endoplasmic reticulum, extracellular	45.15	48.99
CDX72120	Canola	endoplasmic reticulum	45.15	48.89
CDX67653	Canola	endoplasmic reticulum	45.34	48.6
GSMUA_Achr9P21030_001	Banana	endoplasmic reticulum, golgi	33.77	48.14
Bra003247.1-P	Field mustard	endoplasmic reticulum	44.78	48.0
Solyc10g078280.2.1	Tomato	endoplasmic reticulum, golgi	43.84	47.67
PGSC0003DMT400018545	Potato	endoplasmic reticulum	43.28	46.68
GSMUA_Achr11P...	Banana	extracellular, golgi	34.51	46.48
GSMUA_Achr7P17780_001	Banana	endoplasmic reticulum, golgi	34.14	42.56
TraesCS2D01G535800.1	Wheat	mitochondrion	30.41	39.85
TraesCS6D01G227200.1	Wheat	endoplasmic reticulum	39.93	39.56
TraesCS2D01G404600.1	Wheat	golgi	38.81	39.32
TraesCS1D01G359100.1	Wheat	endoplasmic reticulum	38.81	39.17
TraesCS6D01G193600.1	Wheat	golgi	37.69	39.15
TraesCS5D01G410100.1	Wheat	endoplasmic reticulum, plasma membrane	40.11	38.39
TraesCS1D01G276600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	36.94	37.64
TraesCS1D01G239600.1	Wheat	endoplasmic reticulum	36.94	37.43
TraesCS3D01G364300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	36.94	37.22
TraesCS5D01G137000.1	Wheat	endoplasmic reticulum, vacuole	35.26	37.2
TraesCS2D01G535700.1	Wheat	extracellular, plasma membrane	34.51	36.71
TraesCS1D01G158400.1	Wheat	peroxisome, plastid	37.31	36.43
TraesCS3D01G361200.1	Wheat	plastid	36.01	35.61
TraesCS7D01G520200.1	Wheat	plastid	37.5	35.45
GSMUA_Achr2P03460_001	Banana	extracellular, golgi	40.11	26.84

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF31	SUPFAM:SSF48264	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3D01G325600	EnsemblPlants:TraesCS3D01G325600.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:+:438438050..438439660

Molecular Weight (calculated)

60127.4 Da

IEP (calculated)

7.227

GRAVY (calculated)

-0.160

Length

536 amino acids

Sequence
(BLAST)

001: MQQLYLGIFP FCCTNSLLQF GLVKPEIPIA MELPLTSALL LLLPLLCFLW LRRDTRRQSR SDGLKAYPII GTLPHFVKNQ HRLIEWSAGV LARCPTYTMT
101: FNFRGLGLGA GVMTANPANV EHVAKANFQN YPKGEFVVSV IEDLLGHGIF NSDGDQWLRQ RKAASYEFNT RSLRNFVVSA VGSEVVDRLL PLLERAGRDG
201: RTVDVQDVLE RFAFDTICCV VFDEDPACLA EEEWPGADGR AEFMRALTDA QNIVMARFMS PVKWAWRLQR LLNVGPERRM RDAVATIHGY IDRAVRERGE
301: RGAAAGLARK DDFLSRFASS GEHSDEGLRD VVTNFIVAGR DTTSSALSWF FWVLSGRPDV EDKIVREVRA ARASSGEGSF GYEELRSMQY LQAAITESMR
401: LYPPVAMDTH CCQREDVLPD GTLVGKGWQV TYSAYAMARL EELWGADCAE FRPERWLDEE GAFRPESTSK YPVFHAGPRM CLGKEMAYIQ MKSIVAGVLE
501: RFSLRHVGGE GHPRLVMSLT LRMGGGLPMQ VKSRGS

Best Arabidopsis Sequence Match ( AT1G34540.1 )
(BLAST)

001: MALLIFIFLL CFPISIFFIF FTKKSSSEFG FKSYPIVGSF PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKQQLIMTA NPSNVEYMLK TKFESFPKGQ
101: QFTSVLEDFL GHGIFNSDGD MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLVE AATTGKLIDL QDILERFAFD NICKLAFNVD CACLGHDGAV
201: GVNFMRAFET AATIISQRFR SVASCAWRIK KKLNIGSERV LRESIATVHK FADEIVRNRI DQGRSSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV EDKILQELNS IRARTGKRIG EVYGFEHLKM MNYLHAAITE SLRLYPPVPV DIKSCAEDNV LPDGTFVGKG WAITYNIFAM
401: GRMESIWGKD CDRFDPERWI DETNGCFRGE DPSKFPAFHA GPRMCVGKDM AYIQMKSIVA AVLERFVVEV PGKERPEILL SMTLRIKGGL FARVQERS

Arabidopsis Description

CYP94D1CYP94D1 [Source:UniProtKB/TrEMBL;Acc:A0A178WEM5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.