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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 3
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019551.1-P Field mustard endoplasmic reticulum 100.0 93.43
CDY56885 Canola mitochondrion 54.16 89.75
AT3G48520.1 Thale cress endoplasmic reticulum 86.78 80.43
CDY08079 Canola endoplasmic reticulum 86.35 80.04
CDY59153 Canola endoplasmic reticulum 86.14 79.84
CDY71281 Canola endoplasmic reticulum, golgi 72.49 71.13
CDX84409 Canola endoplasmic reticulum 72.49 71.13
CDY16724 Canola endoplasmic reticulum, golgi 71.22 70.91
CDY48144 Canola endoplasmic reticulum, golgi 70.36 69.62
PGSC0003DMT400039271 Potato cytosol, endoplasmic reticulum, mitochondrion 55.22 55.94
VIT_17s0000g01490.t01 Wine grape endoplasmic reticulum, golgi 60.34 55.27
Solyc03g111280.1.1 Tomato endoplasmic reticulum 57.57 54.88
Solyc03g111300.1.1 Tomato endoplasmic reticulum 57.14 54.58
PGSC0003DMT400039272 Potato endoplasmic reticulum 57.57 54.55
Solyc03g111290.1.1 Tomato endoplasmic reticulum 56.93 54.05
PGSC0003DMT400039412 Potato endoplasmic reticulum 56.08 53.78
KRH66027 Soybean endoplasmic reticulum 58.0 53.54
KRH66025 Soybean endoplasmic reticulum 58.0 53.54
KRH75826 Soybean plastid 56.72 52.78
KRH06949 Soybean golgi, plasma membrane 56.93 52.05
GSMUA_Achr6P27620_001 Banana endoplasmic reticulum 47.12 52.0
KRG94521 Soybean endoplasmic reticulum, plasma membrane 55.65 51.58
CDX77090 Canola endoplasmic reticulum, golgi 53.94 51.42
CDY70403 Canola endoplasmic reticulum, golgi 53.52 51.02
VIT_14s0068g02120.t01 Wine grape endoplasmic reticulum, plastid 58.21 50.93
PGSC0003DMT400039270 Potato cytosol, endoplasmic reticulum, plastid 31.34 50.34
Zm00001d049201_P001 Maize endoplasmic reticulum 54.16 49.03
KXG28317 Sorghum endoplasmic reticulum 54.58 48.95
Zm00001d004664_P001 Maize endoplasmic reticulum 53.52 48.74
Solyc02g094110.1.1 Tomato endoplasmic reticulum 53.3 48.73
GSMUA_Achr8P28290_001 Banana plastid 48.4 48.71
PGSC0003DMT400052065 Potato endoplasmic reticulum 53.73 48.46
GSMUA_Achr3P19530_001 Banana endoplasmic reticulum 46.48 47.29
TraesCS1A01G351600.1 Wheat endoplasmic reticulum 53.3 47.17
TraesCS1D01G359100.1 Wheat endoplasmic reticulum 53.3 47.08
Os12t0443000-00 Rice endoplasmic reticulum, plasma membrane 52.24 46.31
TraesCS1B01G371900.1 Wheat plastid 53.73 45.57
HORVU1Hr1G080680.1 Barley golgi, peroxisome, plastid 53.3 43.4
CDY56777 Canola endoplasmic reticulum, extracellular 44.35 42.11
CDX72120 Canola endoplasmic reticulum 43.92 41.62
CDY32022 Canola endoplasmic reticulum 43.92 41.28
CDY32023 Canola endoplasmic reticulum 43.92 41.2
CDX67653 Canola endoplasmic reticulum 43.71 41.0
CDX67652 Canola endoplasmic reticulum 43.5 40.8
CDX71432 Canola endoplasmic reticulum, extracellular 41.58 39.55
CDY04506 Canola endoplasmic reticulum, extracellular 41.15 39.23
CDY70784 Canola cytosol 8.32 38.61
CDY40805 Canola endoplasmic reticulum, golgi, plastid 34.12 33.33
CDX84956 Canola endoplasmic reticulum 35.82 33.33
CDY27586 Canola endoplasmic reticulum 36.03 33.27
CDY21086 Canola endoplasmic reticulum, golgi 29.42 33.17
CDY61020 Canola endoplasmic reticulum, extracellular 34.54 32.93
CDY18885 Canola endoplasmic reticulum 37.95 32.9
CDX74778 Canola endoplasmic reticulum 37.95 32.9
CDY19394 Canola endoplasmic reticulum, golgi 36.89 32.83
CDX71150 Canola endoplasmic reticulum, extracellular 34.12 32.59
CDX98008 Canola endoplasmic reticulum 36.89 32.4
CDY02213 Canola plastid 37.95 32.01
CDY34587 Canola endoplasmic reticulum, golgi, plasma membrane 34.97 31.84
CDY61911 Canola plastid 37.74 31.83
CDY46948 Canola endoplasmic reticulum, golgi, plastid 37.53 31.71
CDY38015 Canola endoplasmic reticulum 35.82 31.28
CDX90044 Canola extracellular, golgi 35.39 30.86
CDY07223 Canola endoplasmic reticulum 36.25 30.41
CDY66201 Canola endoplasmic reticulum 36.25 30.41
CDY15167 Canola endoplasmic reticulum, golgi 35.39 29.91
CDY39170 Canola endoplasmic reticulum 33.9 29.66
CDY04194 Canola endoplasmic reticulum 33.69 29.48
CDY32676 Canola endoplasmic reticulum 24.73 29.15
CDY02846 Canola endoplasmic reticulum, golgi 23.88 29.09
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13GO:A0A078HJR3UniProt:A0A078HJR3EnsemblPlants:CDY37921ProteinID:CDY37921
ProteinID:CDY37921.1ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016705
GO:GO:0020037GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00064924001InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463PANTHER:PTHR24296PANTHER:PTHR24296:SF5SUPFAM:SSF48264SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EE0932SEG:seg::::
Description
BnaA06g18960DBnaA06g18960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJR3]
Coordinates
chrLK032411:+:270539..272047
Molecular Weight (calculated)
53075.5 Da
IEP (calculated)
9.764
GRAVY (calculated)
-0.139
Length
469 amino acids
Sequence
(BLAST)
001: MSFLMSFFVI AFLIIIISIF SSSSTKKTQE TNVNGPPSYP LIGSILSFNK NRHRLLQWYT KLLRLSPSQT ITIPLLGNRR TIVTTNPENV EYILKTNFFN
101: FPKGRPFTDL LGDLLGQGIF NVDGHSWSSQ RKLASHEFST RSLRSFAFEV LREEVETRIV PVLSTAADVG TTVDLQDAFD TAAEISARRA TEPLYAVWKA
201: KRVLNVGSER RLREAIRTVH ELVSEIVRAK RKSLEIGTGQ EAKQDLLSRF LASGHDSEAV RDMVISFIMA GRDTTSAAMT WLFWLLSEND DVEKKLLQEV
301: EPLMSLGLGF EELKEMSYMK ACLCEAMRLY PPVSWDSKHA ANDDVLPDGT RVKKGDKVTY FPYGMGRMEN LWGKDCEEFK PSRWFDSEPG ITEPVLKPVS
401: PFKFPVFQAG PRVCIGKEMA FMQMKFVVGS VLSRFEIIPV SKHKPVFVPL LTAHMAGGLK VKIKRREIK
Best Arabidopsis Sequence Match ( AT3G48520.1 )
(BLAST)
001: MAFLLSFLIL AFLITIIFFL SSSSTKKVQE NTTYGPPSYP LIGSILSFNK NRHRLLQWYT ELLRLSPSQT ILVPLLGNRR TIITTNPLNV EYILKTNFFN
101: FPKGKPFTDL LGDLLGGGIF NVDGHSWSSQ RKLASHEFST RSLRSFAFEV LKDEVENRLV PVLSTAADVG TTVDLQDVLK RFAFDVVCKV SLGWDPDCLD
201: LTRPVNPLVE AFDTAAEISA RRATEPIYAV WKTKRVLNVG SERKLREAIR TVHVLVSEIV RAKKKSLEIG TGAEAKQDLL SRFLAAGHNG EAVRDMVISF
301: IMAGRDTTSA AMTWLFWLLT ENDDVERKIL EEVDPLVSLG LGFEDLKEMA YTKACLCEAM RLYPPVSWDS KHAANDDVLP DGTRVKRGDK VTYFPYGMGR
401: METLWGTDSE EFNPNRWFDS EPGSTRPVLK PISPYKFPVF QAGPRVCVGK EMAFMQMKYV VGSVLSRFEI VPVNKDRPVF VPLLTAHMAG GLKVKIKRRS
501: HILNNV
Arabidopsis Description
CYP94B3CYP94B3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8H3]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.