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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 7
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • peroxisome 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, peroxisome, plastid, secretory
BaCelLo:secretory
EpiLoc:peroxisome
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004664_P001 Maize endoplasmic reticulum 88.53 89.9
Zm00001d049201_P001 Maize endoplasmic reticulum 88.91 89.77
TraesCS1A01G351600.1 Wheat endoplasmic reticulum 74.0 73.02
TraesCS1D01G359100.1 Wheat endoplasmic reticulum 74.0 72.88
TraesCS1B01G371900.1 Wheat plastid 74.0 69.98
HORVU1Hr1G080680.1 Barley golgi, peroxisome, plastid 74.19 67.36
GSMUA_Achr6P27620_001 Banana endoplasmic reticulum 49.52 60.94
PGSC0003DMT400039271 Potato cytosol, endoplasmic reticulum, mitochondrion 51.82 58.53
PGSC0003DMT400039270 Potato cytosol, endoplasmic reticulum, plastid 32.12 57.53
Solyc03g111300.1.1 Tomato endoplasmic reticulum 53.35 56.82
GSMUA_Achr3P19530_001 Banana endoplasmic reticulum 49.9 56.62
PGSC0003DMT400039272 Potato endoplasmic reticulum 53.54 56.57
Solyc03g111280.1.1 Tomato endoplasmic reticulum 52.96 56.3
PGSC0003DMT400039412 Potato endoplasmic reticulum 52.58 56.24
Solyc03g111290.1.1 Tomato endoplasmic reticulum 52.77 55.87
GSMUA_Achr8P28290_001 Banana plastid 49.33 55.36
CDY08079 Canola endoplasmic reticulum 53.35 55.14
CDY59153 Canola endoplasmic reticulum 53.35 55.14
Bra018051.1-P Field mustard endoplasmic reticulum 53.35 55.14
AT3G48520.1 Thale cress endoplasmic reticulum 53.15 54.94
CDY37921 Canola endoplasmic reticulum 48.95 54.58
Bra019551.1-P Field mustard endoplasmic reticulum 52.39 54.58
CDY71281 Canola endoplasmic reticulum, golgi 49.33 53.97
KRH75826 Soybean plastid 52.01 53.97
CDX84409 Canola endoplasmic reticulum 49.14 53.77
Bra038632.1-P Field mustard endoplasmic reticulum, golgi 48.95 53.56
KRH66027 Soybean endoplasmic reticulum 52.01 53.54
KRH66025 Soybean endoplasmic reticulum 52.01 53.54
Bra029224.1-P Field mustard extracellular, golgi 52.2 53.32
VIT_17s0000g01490.t01 Wine grape endoplasmic reticulum, golgi 52.2 53.32
CDY16724 Canola endoplasmic reticulum, golgi 47.61 52.87
Bra035844.1-P Field mustard endoplasmic reticulum, golgi 47.42 52.65
KRG94521 Soybean endoplasmic reticulum, plasma membrane 50.86 52.57
CDY48144 Canola endoplasmic reticulum, golgi 47.42 52.32
KRH06949 Soybean golgi, plasma membrane 51.05 52.05
VIT_14s0068g02120.t01 Wine grape endoplasmic reticulum, plastid 52.96 51.68
CDY56885 Canola mitochondrion 27.72 51.24
Solyc02g094110.1.1 Tomato endoplasmic reticulum 49.52 50.49
PGSC0003DMT400052065 Potato endoplasmic reticulum 49.9 50.19
CDX77090 Canola endoplasmic reticulum, golgi 46.85 49.8
AT3G01900.1 Thale cress endoplasmic reticulum 46.85 49.4
CDY70403 Canola endoplasmic reticulum, golgi 46.46 49.39
Bra040552.1-P Field mustard endoplasmic reticulum, golgi 46.46 49.39
AT5G63450.2 Thale cress endoplasmic reticulum, plasma membrane, plastid 51.43 47.36
EER95239 Sorghum endoplasmic reticulum 42.83 43.24
OQU82886 Sorghum endoplasmic reticulum, plasma membrane 41.49 42.63
EES16641 Sorghum endoplasmic reticulum 41.11 42.24
EER92623 Sorghum endoplasmic reticulum 41.3 41.62
EES15562 Sorghum endoplasmic reticulum, golgi 41.87 40.04
EES04227 Sorghum endoplasmic reticulum, extracellular 40.92 39.7
EES03915 Sorghum plastid 39.96 39.43
OQU75917 Sorghum mitochondrion 35.76 39.2
EES19608 Sorghum plastid 39.96 39.07
EES18245 Sorghum endoplasmic reticulum, golgi 38.24 38.91
EES18148 Sorghum endoplasmic reticulum, extracellular 38.43 38.36
EER95246 Sorghum cytosol 33.08 37.69
EES07097 Sorghum golgi 38.62 37.69
KXG38289 Sorghum plastid 37.28 35.58
OQU85673 Sorghum cytosol 33.27 35.22
OQU87885 Sorghum plastid 36.52 34.92
EES12648 Sorghum endoplasmic reticulum 35.76 34.76
Protein Annotations
Gene3D:1.10.630.10MapMan:11.7.3.4UniProt:A0A1B6PRL5InterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152
GO:GO:0016705GO:GO:0020037GO:GO:0055114InterPro:IPR036396EnsemblPlants:KXG28317ProteinID:KXG28317
ProteinID:KXG28317.1PFAM:PF00067PRINTS:PR00385PRINTS:PR00463PANTHER:PTHR24296PANTHER:PTHR24296:SF5
EnsemblPlantsGene:SORBI_3005G109000SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0001C80625SEG:seg:
Description
hypothetical protein
Coordinates
chr5:-:21259432..21261780
Molecular Weight (calculated)
57647.8 Da
IEP (calculated)
8.470
GRAVY (calculated)
0.020
Length
523 amino acids
Sequence
(BLAST)
001: MICLYTLWLA ACCLLLLLYS VRFRSGFSHG SGPRSYPMIG CLIAFYQNRW RLLDWYTELL AASPTQTIVV DRLGARRTVV TANPANVEHI LKSNFGNYPK
101: GKPFTDILGD LLGTGIFNVD GELWYAQRKL VSHEFSARAL RDLEFAVLED EARERLVPAL SLAAARGGVV DMQDLLRRFS FDVICRVSLG VDPGCLDPAL
201: PEAPRLAAAF DAAAGIIARR GAAPVAAVWK AKRALDVGSE RRLREEIRVI HEAVMDLIHI RKKERGLQQL QEVNAGGRSD LLSRMIECGY PDEAIRDMVI
301: SFIMAGRDTT SSALTWFFWL LTRHRDVERE VLWDITTATG GSHAAGGQGK MRVLHAALCE TMRLYPPVAW DSKHAAAGDV LPDGTRVERG DRVTYFQYGM
401: GRMESIWGAD AAEFSLQRWL SLPEDNVTPP PAAVAAGVSP FKYPVFQAGP RTCLGKEMAF VQMKFVASTV LRRFELVPVD EGRVPVFVPL MTAHMAGGLN
501: VTVRSRREPP IAAAAAASSG NSN
Best Arabidopsis Sequence Match ( AT3G48520.1 )
(BLAST)
001: MAFLLSFLIL AFLITIIFFL SSSSTKKVQE NTTYGPPSYP LIGSILSFNK NRHRLLQWYT ELLRLSPSQT ILVPLLGNRR TIITTNPLNV EYILKTNFFN
101: FPKGKPFTDL LGDLLGGGIF NVDGHSWSSQ RKLASHEFST RSLRSFAFEV LKDEVENRLV PVLSTAADVG TTVDLQDVLK RFAFDVVCKV SLGWDPDCLD
201: LTRPVNPLVE AFDTAAEISA RRATEPIYAV WKTKRVLNVG SERKLREAIR TVHVLVSEIV RAKKKSLEIG TGAEAKQDLL SRFLAAGHNG EAVRDMVISF
301: IMAGRDTTSA AMTWLFWLLT ENDDVERKIL EEVDPLVSLG LGFEDLKEMA YTKACLCEAM RLYPPVSWDS KHAANDDVLP DGTRVKRGDK VTYFPYGMGR
401: METLWGTDSE EFNPNRWFDS EPGSTRPVLK PISPYKFPVF QAGPRVCVGK EMAFMQMKYV VGSVLSRFEI VPVNKDRPVF VPLLTAHMAG GLKVKIKRRS
501: HILNNV
Arabidopsis Description
CYP94B3CYP94B3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8H3]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.