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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • plastid 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0858350-01 Rice endoplasmic reticulum 85.85 86.83
TraesCS3B01G403400.1 Wheat peroxisome, plasma membrane, plastid 82.08 82.54
HORVU3Hr1G084450.1 Barley endoplasmic reticulum 80.19 81.73
TraesCS3D01G364300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 81.89 81.58
TraesCS3A01G371200.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 80.75 81.52
EES19608 Sorghum plastid 80.19 79.44
Zm00001d012304_P001 Maize plasma membrane 73.4 72.04
GSMUA_Achr3P22750_001 Banana endoplasmic reticulum, golgi, plastid 50.75 67.08
GSMUA_Achr8P07690_001 Banana endoplasmic reticulum, plasma membrane 49.06 64.36
VIT_06s0080g00090.t01 Wine grape cytosol 52.26 62.25
OQU82886 Sorghum endoplasmic reticulum, plasma membrane 58.68 61.1
GSMUA_AchrUn_... Banana endoplasmic reticulum 43.02 60.64
VIT_13s0074g00790.t01 Wine grape cytosol 53.02 59.91
EES16641 Sorghum endoplasmic reticulum 56.79 59.14
KRH25192 Soybean plastid 54.34 57.37
KRH30469 Soybean plastid 54.34 56.92
PGSC0003DMT400022922 Potato cytosol 39.25 56.52
AT2G27690.1 Thale cress endoplasmic reticulum 52.08 55.76
Solyc06g074420.1.1 Tomato endoplasmic reticulum 50.57 55.26
CDY04506 Canola endoplasmic reticulum, extracellular 50.94 54.88
PGSC0003DMT400023141 Potato endoplasmic reticulum, plasma membrane 51.32 54.84
PGSC0003DMT400018331 Potato endoplasmic reticulum 50.57 54.81
GSMUA_Achr8P33070_001 Banana endoplasmic reticulum, extracellular 44.34 54.65
Bra012006.1-P Field mustard endoplasmic reticulum, extracellular 51.13 54.53
CDX71432 Canola endoplasmic reticulum, extracellular 50.57 54.36
Solyc10g083400.1.1 Tomato endoplasmic reticulum 50.75 54.12
KRH30881 Soybean endoplasmic reticulum, plasma membrane, plastid 53.02 53.83
PGSC0003DMT400050139 Potato endoplasmic reticulum, plasma membrane 51.32 53.44
VIT_08s0007g03660.t01 Wine grape endoplasmic reticulum, plasma membrane 54.15 52.28
KRH67891 Soybean endoplasmic reticulum, plasma membrane 52.64 51.67
OQU75917 Sorghum mitochondrion 36.6 40.67
EES15562 Sorghum endoplasmic reticulum, golgi 41.7 40.4
EER92623 Sorghum endoplasmic reticulum 39.43 40.27
EES18245 Sorghum endoplasmic reticulum, golgi 38.87 40.08
KXG28317 Sorghum endoplasmic reticulum 39.43 39.96
EER95239 Sorghum endoplasmic reticulum 38.87 39.77
EES07097 Sorghum golgi 38.87 38.43
EER95246 Sorghum cytosol 33.21 38.34
EES18148 Sorghum endoplasmic reticulum, extracellular 37.74 38.17
EES04227 Sorghum endoplasmic reticulum, extracellular 38.68 38.03
OQU85673 Sorghum cytosol 34.15 36.64
EES12648 Sorghum endoplasmic reticulum 34.72 34.2
OQU87885 Sorghum plastid 34.34 33.27
KXG38289 Sorghum plastid 33.21 32.12
Protein Annotations
Gene3D:1.10.630.10MapMan:11.7.3.3UniProt:C5XQH3ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfEnsemblPlants:EES03915ProteinID:EES03915ProteinID:EES03915.2GO:GO:0000398GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005681GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016705GO:GO:0020037GO:GO:0055114InterPro:IPR036396
PFAM:PF00067PRINTS:PR00385PRINTS:PR00463PANTHER:PTHR24296PANTHER:PTHR24296:SF21EnsemblPlantsGene:SORBI_3003G362700
SUPFAM:SSF48264unigene:Sbi.12063TMHMM:TMhelixUniParc:UPI00081AB24BSEG:seg:
Description
hypothetical protein
Coordinates
chr3:-:68012293..68015199
Molecular Weight (calculated)
58267.4 Da
IEP (calculated)
9.125
GRAVY (calculated)
0.066
Length
530 amino acids
Sequence
(BLAST)
001: MVMAAETGAA ALRDAASALA SSMQPQVAAV FFVSAACTVA LAALLAVLRM RPPWWCACPV CEAYLTASWA ADFDNLCDWY AHLLRTSPAQ TVHVHVLRNV
101: LTANPATVDH MLRARFDNYP KGAPFSAILA DFLGRGIFNV DGDAWLFQRK LAAAELASPA LRAFAVRVVA SELRSRLIPL LHSASREREG EEGRVLDLQD
201: VFRRFAFDCI CKISFGLDPG CLELSMPVSS FERAFDMAST LSARRATVPM HIIWKLKRLL NFGDERRLRD AVHLVDTLAA EVIRQRRKLG GAASGGSDLL
301: SRFMGSINDD KYLRDIVVSF MLAGRDTVAS ALTAFFLLLS DHPEVAAAIR DEATRVAGDD VRLTASTFNK LKGMHYVHAA LSESMRLFPP VQFDSKFAAG
401: DDTLPDGTAV AKGTRVTYHA YAMGRMESVW GPDCGEFRPE RWLQNGRFVP ENPYRYPVFQ AGARVCIGKE LALMEMKAVI VAVVRSFDIE ATDRSSRRPK
501: FAPGLTATFA GGLPVRVRRR ARVSGHNPPI
Best Arabidopsis Sequence Match ( AT2G27690.1 )
(BLAST)
001: MLLIISFTIV SFFFIIIFSL FHLLFLQKLR YCNCEICHAY LTSSWKKDFI NLSDWYTHLL RRSPTSTIKV HVLNSVITAN PSNVEHILKT NFHNYPKGKQ
101: FSVILGDLLG RGIFNSDGDT WRFQRKLASL ELGSVSVRVF AHEIVKTEIE TRLLPILTSF SDNPGSVLDL QDVFRRFSFD TISKLSFGFD PDCLRLPFPI
201: SEFAVAFDTA SLLSAKRALA PFPLLWKTKR LLRIGSEKKL QESINVINRL AGDLIKQRRL TGLMGKNDLI SRFMAVVAED DDEYLRDIVV SFLLAGRDTV
301: AAGLTGFFWL LTRHPEVENR IREELDRVMG TGFDSVTARC DEMREMDYLH ASLYESMRLF PPVQFDSKFA LNDDVLSDGT FVNSGTRVTY HAYAMGRMDR
401: IWGPDYEEFK PERWLDNEGK FRPENPVKYP VFQAGARVCI GKEMAIMEMK SIAVAIIRRF ETRVASPETT ETLRFAPGLT ATVNGGLPVM IQERS
Arabidopsis Description
CYP94C1Cytochrome P450 94C1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.