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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • plastid 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038300_P002 Maize vacuole 71.22 95.73
Os05t0445100-01 Rice plasma membrane 83.74 86.32
HORVU1Hr1G073700.1 Barley endoplasmic reticulum, plasma membrane, plastid 81.87 84.72
TraesCS1A01G277400.1 Wheat endoplasmic reticulum 83.36 84.47
TraesCS1B01G286300.1 Wheat endoplasmic reticulum, plasma membrane 82.62 84.35
TraesCS1D01G276600.1 Wheat endoplasmic reticulum, plasma membrane, plastid 82.62 84.03
EES03915 Sorghum plastid 79.44 80.19
GSMUA_Achr3P22750_001 Banana endoplasmic reticulum, golgi, plastid 48.41 64.59
GSMUA_Achr8P07690_001 Banana endoplasmic reticulum, plasma membrane 48.41 64.11
VIT_06s0080g00090.t01 Wine grape cytosol 51.96 62.47
GSMUA_AchrUn_... Banana endoplasmic reticulum 43.18 61.44
OQU82886 Sorghum endoplasmic reticulum, plasma membrane 57.94 60.9
EES16641 Sorghum endoplasmic reticulum 56.07 58.94
VIT_13s0074g00790.t01 Wine grape cytosol 51.59 58.85
PGSC0003DMT400022922 Potato cytosol 39.44 57.34
KRH25192 Soybean plastid 53.46 56.97
KRH30469 Soybean plastid 53.27 56.32
PGSC0003DMT400023141 Potato endoplasmic reticulum, plasma membrane 52.15 56.25
Solyc06g074420.1.1 Tomato endoplasmic reticulum 49.91 55.05
PGSC0003DMT400018331 Potato endoplasmic reticulum 50.28 55.01
Solyc10g083400.1.1 Tomato endoplasmic reticulum 50.84 54.73
AT2G27690.1 Thale cress endoplasmic reticulum 50.28 54.34
CDY04506 Canola endoplasmic reticulum, extracellular 49.91 54.27
CDX71432 Canola endoplasmic reticulum, extracellular 49.91 54.16
PGSC0003DMT400050139 Potato endoplasmic reticulum, plasma membrane 51.4 54.03
GSMUA_Achr8P33070_001 Banana endoplasmic reticulum, extracellular 43.36 53.95
Bra012006.1-P Field mustard endoplasmic reticulum, extracellular 49.72 53.52
KRH30881 Soybean endoplasmic reticulum, plasma membrane, plastid 51.96 53.26
VIT_08s0007g03660.t01 Wine grape endoplasmic reticulum, plasma membrane 54.39 53.01
KRH67891 Soybean endoplasmic reticulum, plasma membrane 51.96 51.48
OQU75917 Sorghum mitochondrion 36.26 40.67
KXG28317 Sorghum endoplasmic reticulum 39.07 39.96
EER95239 Sorghum endoplasmic reticulum 38.69 39.96
EER92623 Sorghum endoplasmic reticulum 38.69 39.88
EES18245 Sorghum endoplasmic reticulum, golgi 38.32 39.88
EES15562 Sorghum endoplasmic reticulum, golgi 39.63 38.76
EES07097 Sorghum golgi 38.13 38.06
EER95246 Sorghum cytosol 32.52 37.91
EES04227 Sorghum endoplasmic reticulum, extracellular 37.94 37.66
OQU85673 Sorghum cytosol 34.39 37.25
EES18148 Sorghum endoplasmic reticulum, extracellular 36.45 37.21
EES12648 Sorghum endoplasmic reticulum 35.14 34.94
OQU87885 Sorghum plastid 34.95 34.19
KXG38289 Sorghum plastid 33.08 32.3
Protein Annotations
Gene3D:1.10.630.10MapMan:11.7.3.3UniProt:C5YYS3InterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
EnsemblPlants:EES19608ProteinID:EES19608ProteinID:EES19608.2GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005506GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021
GO:GO:0016705GO:GO:0020037GO:GO:0055114InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463PANTHER:PTHR24296PANTHER:PTHR24296:SF21EnsemblPlantsGene:SORBI_3009G155500SUPFAM:SSF48264TMHMM:TMhelix
UniParc:UPI00081ADD98SEG:seg::::
Description
hypothetical protein
Coordinates
chr9:+:51285046..51286768
Molecular Weight (calculated)
58968.1 Da
IEP (calculated)
8.253
GRAVY (calculated)
0.066
Length
535 amino acids
Sequence
(BLAST)
001: MVAYAYATTL YVAAQAARLP SSLQPQAVAA VFFTSAACTV ALAVLLALLR LRPPWWCACA VCEAYVTASW AAEFDNLCDW YAHLLRRAPG RTVHVHVLGN
101: VLTANPPTVD HMLRGRFDNY PKGAPFSAIL ADFLGRGIFN VDGDSWLFQR KLAAAELASP ALRCFAAGVV ASELRCRLIP LLYSAAGDGD SSGDRLLDLQ
201: DVFRRFAFDC ICRISFGLDP GCLELSLPMS AFADAFDTAS MLSARRATAP MHVLWKLKRL LNVGEERELR DAIRLVDTLA AEVIRQRRKL GTAASGDDLL
301: SRFMGSINDD KYLRDIVVSF MLAGRDTVAS ALTAFFLLLS DHPDVATAIR DEVSRVAGDD DRDGHAAASS EKLKDMHYVH AALHECMRLF PPVQFDSKFA
401: AGDDMLPDGT FVARGTRVTY HAYAMGRMES VWGPDCAEFR PDRWLHDGRF VPESPYRYPV FQGGVRVCIG RELAIMEMKS VIVSVVQSFD IEAVGRSSHR
501: PKFAPGLTAT FAGGVPVRVR RRARARVSEL RRPPR
Best Arabidopsis Sequence Match ( AT2G27690.1 )
(BLAST)
001: MLLIISFTIV SFFFIIIFSL FHLLFLQKLR YCNCEICHAY LTSSWKKDFI NLSDWYTHLL RRSPTSTIKV HVLNSVITAN PSNVEHILKT NFHNYPKGKQ
101: FSVILGDLLG RGIFNSDGDT WRFQRKLASL ELGSVSVRVF AHEIVKTEIE TRLLPILTSF SDNPGSVLDL QDVFRRFSFD TISKLSFGFD PDCLRLPFPI
201: SEFAVAFDTA SLLSAKRALA PFPLLWKTKR LLRIGSEKKL QESINVINRL AGDLIKQRRL TGLMGKNDLI SRFMAVVAED DDEYLRDIVV SFLLAGRDTV
301: AAGLTGFFWL LTRHPEVENR IREELDRVMG TGFDSVTARC DEMREMDYLH ASLYESMRLF PPVQFDSKFA LNDDVLSDGT FVNSGTRVTY HAYAMGRMDR
401: IWGPDYEEFK PERWLDNEGK FRPENPVKYP VFQAGARVCI GKEMAIMEMK SIAVAIIRRF ETRVASPETT ETLRFAPGLT ATVNGGLPVM IQERS
Arabidopsis Description
CYP94C1Cytochrome P450 94C1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.