CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
endoplasmic reticulum 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92623	Sorghum	endoplasmic reticulum	85.4	75.53
Zm00001d028258_P001	Maize	endoplasmic reticulum	83.44	73.8
EER95239	Sorghum	endoplasmic reticulum	79.96	70.85
TraesCS4A01G063900.1	Wheat	endoplasmic reticulum	73.42	64.81
TraesCS4B01G241100.1	Wheat	endoplasmic reticulum	72.77	63.86
TraesCS4A01G064000.1	Wheat	endoplasmic reticulum	72.33	63.72
TraesCS4D01G240900.1	Wheat	endoplasmic reticulum	72.33	63.36
HORVU4Hr1G066880.1	Barley	endoplasmic reticulum	72.11	63.29
TraesCS4D01G240800.1	Wheat	endoplasmic reticulum, golgi	72.11	62.69
HORVU4Hr1G066870.1	Barley	endoplasmic reticulum	72.33	62.64
TraesCS2A01G577800.1	Wheat	endoplasmic reticulum	68.85	61.12
HORVU2Hr1G124430.1	Barley	endoplasmic reticulum	68.41	60.38
TraesCS2D01G589200.1	Wheat	endoplasmic reticulum	68.41	60.38
Os03t0223100-02	Rice	endoplasmic reticulum, golgi	70.81	60.19
TraesCS4B01G241300.1	Wheat	endoplasmic reticulum, golgi	45.97	57.18
KRH66690	Soybean	endoplasmic reticulum	47.71	44.51
Bra003246.1-P	Field mustard	cytosol	40.09	43.5
VIT_08s0040g00820.t01	Wine grape	endoplasmic reticulum	46.84	43.0
AT3G56630.1	Thale cress	endoplasmic reticulum	45.75	42.08
Solyc10g078280.2.1	Tomato	endoplasmic reticulum, golgi	45.1	41.99
EES18245	Sorghum	endoplasmic reticulum, golgi	46.84	41.83
OQU75917	Sorghum	mitochondrion	43.36	41.72
PGSC0003DMT400018545	Potato	endoplasmic reticulum	45.1	41.65
EES15562	Sorghum	endoplasmic reticulum, golgi	49.46	41.5
CDY32022	Canola	endoplasmic reticulum	45.1	41.48
AT1G34540.1	Thale cress	endoplasmic reticulum	44.66	41.16
CDX67652	Canola	endoplasmic reticulum	44.44	40.8
CDY32023	Canola	endoplasmic reticulum	44.01	40.4
Bra007259.1-P	Field mustard	endoplasmic reticulum	43.14	40.16
CDX67653	Canola	endoplasmic reticulum	43.57	40.0
CDX72120	Canola	endoplasmic reticulum	42.92	39.8
CDY56777	Canola	endoplasmic reticulum, extracellular	42.48	39.47
Bra003247.1-P	Field mustard	endoplasmic reticulum	42.48	39.0
EES04227	Sorghum	endoplasmic reticulum, extracellular	41.83	35.62
OQU85673	Sorghum	cytosol	36.82	34.21
OQU87885	Sorghum	plastid	40.09	33.64
EES12648	Sorghum	endoplasmic reticulum	39.0	33.27
EES03915	Sorghum	plastid	38.34	33.21
KXG28317	Sorghum	endoplasmic reticulum	37.69	33.08
EES19608	Sorghum	plastid	37.91	32.52
EES18148	Sorghum	endoplasmic reticulum, extracellular	36.82	32.25
OQU82886	Sorghum	endoplasmic reticulum, plasma membrane	35.08	31.63
EES16641	Sorghum	endoplasmic reticulum	35.08	31.63
EES07097	Sorghum	golgi	36.6	31.34
KXG38289	Sorghum	plastid	35.95	30.11

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	UniProt:C5WSN0	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	EnsemblPlants:EER95246	ProteinID:EER95246	ProteinID:EER95246.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF77	EnsemblPlantsGene:SORBI_3001G451600
SUPFAM:SSF48264	UniParc:UPI0001A8337F	RefSeq:XP_002468248.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:72843576..72845135

Molecular Weight (calculated)

52366.7 Da

IEP (calculated)

9.632

GRAVY (calculated)

-0.410

Length

459 amino acids

Sequence
(BLAST)

001: MVKLEQDLAS IDQGFVLLRS RQRRQAGPTY APGLEPYPLI RHLPQFLANR HRVLDWITEF LERQTTCTFE LRRPGGRTSF ERYRKGPRVS SLLHDFLGRG
101: IFNADGETWR AQRKVASHEF NTRSLRAFVA RCVHAELHGR LLPLLRRAAA SGATLDLQDV LERFAFDNIC RVAFDHDPLQ LPDEGDAAVD SSFADAFRDA
201: ANFSAGRFRY ALPEFWKAKK ALNVGSEKRH RESIAMVHNC ADRIILSRRE EMLSAGFEKH DLLSRFMLLS SRPDVQRRIR DEVAAVRARR RAQGDVDSVA
301: GFDLDVLREM HYVHTAITES MRLYPPVPIN SLRAETDDVL PDGTAVQAGM KSWRSNSYAM GRMKSVWGDD AKEYRPERWL NTGDGTFRPD NPFRFVAFHF
401: HAGPRLCLDK EIAYIQMKSI VACLLEELDV AVDGAYRPRQ VASLTLRMAD GLPVTVKPR

Best Arabidopsis Sequence Match ( AT1G01600.1 )
(BLAST)

001: MEISNAMLLV AIVTGYWLWF KRISRWLKGP RVWPLLGSLP GLIEQRDRMH EWITENLRAC GGTYQTCIFA VPFLAKKQGL VTVTCDPKNL EHMLKTRFDN
101: YPKGPTWQSV FHDLLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMGRW VNRGIKLRFC PILATAQDNA EPVDLQDLIL RLTFDNICGL AFGKDTRTCA
201: PGLPENGFAS AFDRATEASL QRFIIPKFMW KLKKWLGLGL EVSLSRSLGE IDEYLAAVIN TRKQELMSQQ ESGTHQRHDD LLSRFMMKKT ESYSDTFLQH
301: VALNFILAGR DTSSVALSWF FWLITMHPTV EDKIVREICS VLIETRGTDD VASWTEEPLG FDEIDRLVYL KAAISETLRL YPSVPEDSKH VENDDVLPDG
401: TFVPAGSSVT YSIYAAGRMK STWGEDCLEF NPERWISPID GKFINHDQYR FVAFNAGPRI CLGKDLAYLQ MKTIAAAVLL RHRLTVVPGH KVEQKMSLTL
501: FMKNGLLVNL YKRDLQGIIK SLVVKKSDGV SNGQCNGVIG EGVAVYLNTG VAVV

Arabidopsis Description

CYP86A4Cytochrome P450 86A4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMM1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.