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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • vacuole 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:vacuole
MultiLoc:vacuole
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G183600.1 Wheat endoplasmic reticulum, golgi, plastid 93.75 97.25
TraesCS4B01G135200.1 Wheat endoplasmic reticulum 92.8 96.27
HORVU5Hr1G042030.1 Barley endoplasmic reticulum, vacuole 76.14 79.13
HORVU2Hr1G117140.3 Barley endoplasmic reticulum 74.24 77.47
HORVU2Hr1G117080.3 Barley endoplasmic reticulum, extracellular 73.86 77.08
HORVU2Hr1G117150.1 Barley endoplasmic reticulum, plasma membrane 73.48 76.23
GSMUA_Achr5P16800_001 Banana extracellular, golgi 54.36 66.59
GSMUA_Achr6P07480_001 Banana extracellular, golgi 47.54 66.58
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 48.11 64.8
GSMUA_Achr8P29660_001 Banana endoplasmic reticulum, plasma membrane 50.38 62.0
HORVU3Hr1G084450.1 Barley endoplasmic reticulum 58.71 59.62
VIT_06s0080g00090.t01 Wine grape cytosol 50.19 59.55
VIT_13s0074g00790.t01 Wine grape cytosol 52.08 58.64
HORVU1Hr1G073700.1 Barley endoplasmic reticulum, plasma membrane, plastid 57.39 58.61
KRH25192 Soybean plastid 54.55 57.37
KRH30469 Soybean plastid 54.55 56.92
CDY04506 Canola endoplasmic reticulum, extracellular 51.89 55.69
AT2G27690.1 Thale cress endoplasmic reticulum 52.08 55.56
Bra012006.1-P Field mustard endoplasmic reticulum, extracellular 51.89 55.13
Solyc06g074420.1.1 Tomato endoplasmic reticulum 50.57 55.05
CDX71432 Canola endoplasmic reticulum, extracellular 51.33 54.97
PGSC0003DMT400018331 Potato endoplasmic reticulum 50.76 54.81
PGSC0003DMT400022922 Potato cytosol 37.69 54.08
PGSC0003DMT400023141 Potato endoplasmic reticulum, plasma membrane 50.76 54.03
Solyc10g083400.1.1 Tomato endoplasmic reticulum 50.0 53.12
VIT_08s0007g03660.t01 Wine grape endoplasmic reticulum, plasma membrane 54.17 52.09
KRH30881 Soybean endoplasmic reticulum, plasma membrane, plastid 50.76 51.34
PGSC0003DMT400050139 Potato endoplasmic reticulum, plasma membrane 49.24 51.08
KRH67891 Soybean endoplasmic reticulum, plasma membrane 50.38 49.26
HORVU2Hr1G124430.1 Barley endoplasmic reticulum 40.34 40.96
HORVU4Hr1G066880.1 Barley endoplasmic reticulum 39.96 40.34
HORVU4Hr1G066870.1 Barley endoplasmic reticulum 39.96 39.81
HORVU6Hr1G002700.1 Barley endoplasmic reticulum 37.69 38.87
HORVU3Hr1G078760.1 Barley endoplasmic reticulum 37.88 38.54
HORVU3Hr1G078790.2 Barley endoplasmic reticulum, golgi 36.74 38.26
HORVU3Hr1G078810.1 Barley endoplasmic reticulum, golgi 37.31 37.6
HORVU5Hr1G098210.3 Barley mitochondrion 36.17 36.52
HORVU6Hr1G053810.2 Barley endoplasmic reticulum 36.36 36.5
HORVU3Hr1G108150.1 Barley endoplasmic reticulum 36.74 36.33
HORVU1Hr1G080680.1 Barley golgi, peroxisome, plastid 39.58 36.28
HORVU1Hr1G057220.1 Barley endoplasmic reticulum, extracellular 34.85 35.25
HORVU6Hr1G064170.1 Barley plasma membrane 35.8 34.68
HORVU3Hr1G085020.1 Barley endoplasmic reticulum, plasma membrane 35.98 34.48
HORVU1Hr1G042810.1 Barley mitochondrion 36.74 32.28
Protein Annotations
Gene3D:1.10.630.10MapMan:11.7.3.3UniProt:A0A287NL98InterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016705GO:GO:0020037GO:GO:0055114
EnsemblPlantsGene:HORVU4Hr1G025180EnsemblPlants:HORVU4Hr1G025180.1InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
PANTHER:PTHR24296PANTHER:PTHR24296:SF30SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI000B47C3FBSEG:seg
Description
No Description!
Coordinates
chrchr4H:+:146233444..146235398
Molecular Weight (calculated)
57753.2 Da
IEP (calculated)
8.728
GRAVY (calculated)
0.139
Length
528 amino acids
Sequence
(BLAST)
001: KITFFCSSLL LQFKGDGAAM DAATSTGMEE LSWCARCAGL AFLVFSVCVV ALGAALFLAR RWPWCSCHVC RSYLTGSWAR DFTNLGDWYA HLLRCSPTGT
101: VAVHVLGCTI TANPANVEHM LHTRFDNFPK GKPFSAVLGD LLGGGIFNVD GAAWRHQRKM ASLELGSVAV RSYAYGIVAE EVEARLLPLL ADAADNGRVI
201: DLQDVFRRFA FDTICKISFG LDPGCLELDM PMSKLAAAFD TASRLSAMRG AAASPLVWRV KRLLNVGSER ELRKSIRLVD ELAAAMIRQR RKLGVAGSHD
301: LLSRFMASEA HGTAVDDKYL RDIVVSFLLA GRDTVSSALT TIFMLLSKNP AVAAGMRAEA AASEKTRMAS KTTYEHLKSL HYTHAVLYEN MRLFPPVQFD
401: SKFCAADDVL PDGTYVTAGA RVMYHPYAMG RMPRIWGDDC EKFRPERWLT GTGGTFVPES LYRYPVFQAG LRVCLGKELA VMEMKAVSVA VVKQFDVEVV
501: GEQGAAPRFA PGLTASISGG LPVRVRRV
Best Arabidopsis Sequence Match ( AT2G27690.1 )
(BLAST)
001: MLLIISFTIV SFFFIIIFSL FHLLFLQKLR YCNCEICHAY LTSSWKKDFI NLSDWYTHLL RRSPTSTIKV HVLNSVITAN PSNVEHILKT NFHNYPKGKQ
101: FSVILGDLLG RGIFNSDGDT WRFQRKLASL ELGSVSVRVF AHEIVKTEIE TRLLPILTSF SDNPGSVLDL QDVFRRFSFD TISKLSFGFD PDCLRLPFPI
201: SEFAVAFDTA SLLSAKRALA PFPLLWKTKR LLRIGSEKKL QESINVINRL AGDLIKQRRL TGLMGKNDLI SRFMAVVAED DDEYLRDIVV SFLLAGRDTV
301: AAGLTGFFWL LTRHPEVENR IREELDRVMG TGFDSVTARC DEMREMDYLH ASLYESMRLF PPVQFDSKFA LNDDVLSDGT FVNSGTRVTY HAYAMGRMDR
401: IWGPDYEEFK PERWLDNEGK FRPENPVKYP VFQAGARVCI GKEMAIMEMK SIAVAIIRRF ETRVASPETT ETLRFAPGLT ATVNGGLPVM IQERS
Arabidopsis Description
CYP94C1Cytochrome P450 94C1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.