Factsheet for TraesCS1B01G003000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G003300.1	Wheat	nucleus	43.17	58.94
TraesCS6B01G016700.1	Wheat	cytosol	52.03	54.76
TraesCS1B01G002400.1	Wheat	cytosol	58.3	54.48
TraesCS7B01G417100.1	Wheat	cytosol	34.13	41.39
TraesCS1B01G000400.1	Wheat	cytosol	59.04	39.8
HORVU6Hr1G087370.1	Barley	cytosol	28.04	34.55
TraesCS1B01G002300.2	Wheat	endoplasmic reticulum, plasma membrane	60.52	31.72
TraesCS1B01G002800.1	Wheat	extracellular	59.59	29.96
TraesCS7B01G426600.1	Wheat	cytosol	31.37	29.51
TraesCS2B01G579400.2	Wheat	endoplasmic reticulum	48.52	28.56
TraesCS1B01G004600.1	Wheat	cytosol	58.67	28.14
TraesCS7B01G428700.2	Wheat	nucleus	39.48	27.76
TraesCS5B01G568000.3	Wheat	cytosol, extracellular, nucleus	48.89	26.24
TraesCS5B01G295700.1	Wheat	cytosol	40.77	25.82
TraesCS5B01G295900.1	Wheat	cytosol, nucleus, peroxisome	43.54	24.3
TraesCS3B01G606700.1	Wheat	plasma membrane	45.76	23.62
TraesCS1B01G006300.1	Wheat	golgi, plasma membrane	50.55	22.22
TraesCS1B01G000100.1	Wheat	endoplasmic reticulum	52.77	21.41
TraesCS5B01G450600.1	Wheat	plasma membrane	41.14	20.88
Zm00001d048663_P001	Maize	endoplasmic reticulum, plasma membrane	39.48	20.44
TraesCS7B01G428500.1	Wheat	cytosol, endoplasmic reticulum, nucleus	43.73	20.4
TraesCS7B01G426200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	42.8	19.95
EES19322	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	37.64	19.21
Zm00001d009588_P001	Maize	cytosol	28.41	17.89
TraesCS7B01G495600.1	Wheat	cytosol, mitochondrion, plastid	18.82	17.17
TraesCS7B01G428900.1	Wheat	endoplasmic reticulum	22.69	17.11
TraesCS1B01G400800.1	Wheat	endoplasmic reticulum	23.43	16.98
TraesCS7B01G495500.1	Wheat	cytosol	28.41	16.68
TraesCS1B01G003100.1	Wheat	endoplasmic reticulum	40.41	16.48
TraesCS3B01G349500.1	Wheat	cytosol	20.85	15.29
Zm00001d025455_P001	Maize	cytosol	20.66	14.89
Zm00001d000027_P028	Maize	nucleus	28.41	14.57
TraesCS7B01G417300.1	Wheat	cytosol, endoplasmic reticulum, nucleus	16.97	14.51
TraesCS1B01G400600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	32.66	13.88
TraesCS7B01G490500.1	Wheat	extracellular	30.26	13.1
TraesCS7B01G491700.1	Wheat	endoplasmic reticulum, plasma membrane	28.78	12.59
TraesCS3B01G569900.1	Wheat	plasma membrane	56.09	12.42
TraesCS7B01G490300.1	Wheat	extracellular, plasma membrane	28.78	12.27
TraesCS3B01G349800.1	Wheat	cytosol	11.81	11.15
TraesCS3B01G349600.2	Wheat	endoplasmic reticulum, extracellular	11.81	10.79
Os11t0682501-00	Rice	cytosol	6.83	9.66
TraesCS1B01G400700.1	Wheat	cytosol	4.61	6.76
TraesCS2B01G590100.1	Wheat	extracellular	0.74	2.96
TraesCS7B01G430200.1	Wheat	cytosol	1.66	2.0
Os11t0682600-01	Rice	endoplasmic reticulum, extracellular, vacuole	0.37	0.87

Protein Annotations

EnsemblPlants:TraesCS1B01G003000.1	EnsemblPlantsGene:TraesCS1B01G003000	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	ncoils:Coil	PANTHER:PTHR23155
PANTHER:PTHR23155:SF861	PFAM:PF00931	SEG:seg	SUPFAM:SSF52047	MapMan:35.1	:

Description

No Description!

Coordinates

chr1B:+:1969181..1972975

Molecular Weight (calculated)

62311.0 Da

IEP (calculated)

6.327

GRAVY (calculated)

-0.334

Length

542 amino acids

Sequence
(BLAST)

001: MLDISQSDVQ VEQVKNASNE LHKDTPNASE ATSSERLNPG MLKNDIMHAI WLSYQQLNPD IKRCVKYCNV FPKRSKLNKD ELVHLWIAQG FIKTNCATED
101: MEDVAEGYVQ ELVSCSFVQP EEDDYSIKYI TILDLLHDLL DEIVERDYFR IENARNQRGI VWKGDVPRDV CHLFVQNYDG ELITKKILAL ENLRTLIIYV
201: VEKDTPVEEK VIESVCNSLP KLRVLAVAFS REHHPITRPN KFSIPESISQ LKHLCYLAFR TFKCTVILPS ALAELHHIQL LDFGHHSQTS EFTTDNLTNL
301: RYIMCQSVKC PNIGRLISLQ ALPCNTFTVR NVQGYEIKQL RDLNKLRGNL VINCLENVTS KEEALESNLA AKKRVKELSI RWTDGSARWC SPEVEAKVLE
401: GMCPPADLET LMIEGYKGSR YPDWMVDQQN SGPKDLQNLE LKTWSQPGPG PELEAFPHLR MLRLVDCSWV TLPGNMEHLT SLKHLDISLC WNIRLLPTLP
501: RSLEYFYLSY CNDDFIKSCG TDGHPNCRKL EHVHQKEIIR MA

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.