Factsheet for TraesCS6B01G016700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G003300.1	Wheat	nucleus	41.36	53.65
TraesCS1B01G003000.1	Wheat	cytosol	54.76	52.03
TraesCS1B01G002400.1	Wheat	cytosol	57.09	50.69
TraesCS7B01G417100.1	Wheat	cytosol	36.7	42.28
TraesCS1B01G000400.1	Wheat	cytosol	57.86	37.06
TraesCS1B01G002300.2	Wheat	endoplasmic reticulum, plasma membrane	58.06	28.92
TraesCS7B01G426600.1	Wheat	cytosol	31.84	28.47
TraesCS2B01G579400.2	Wheat	endoplasmic reticulum	48.74	27.25
TraesCS1B01G002800.1	Wheat	extracellular	56.7	27.09
TraesCS7B01G428700.2	Wheat	nucleus	39.61	26.46
TraesCS1B01G004600.1	Wheat	cytosol	56.89	25.93
TraesCS5B01G295700.1	Wheat	cytosol	42.14	25.35
TraesCS5B01G568000.3	Wheat	cytosol, extracellular, nucleus	48.74	24.85
TraesCS5B01G295900.1	Wheat	cytosol, nucleus, peroxisome	44.66	23.69
TraesCS3B01G606700.1	Wheat	plasma membrane	42.91	21.05
TraesCS1B01G000100.1	Wheat	endoplasmic reticulum	54.17	20.88
TraesCS1B01G006300.1	Wheat	golgi, plasma membrane	49.9	20.84
TraesCS5B01G450600.1	Wheat	plasma membrane	42.72	20.6
Zm00001d048663_P001	Maize	endoplasmic reticulum, plasma membrane	40.78	20.06
TraesCS7B01G426200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	45.24	20.03
TraesCS7B01G428500.1	Wheat	cytosol, endoplasmic reticulum, nucleus	44.47	19.71
EES19322	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	40.58	19.68
Zm00001d009588_P001	Maize	cytosol	29.9	17.89
TraesCS7B01G495500.1	Wheat	cytosol	31.46	17.55
TraesCS7B01G428900.1	Wheat	endoplasmic reticulum	23.69	16.97
TraesCS7B01G495600.1	Wheat	cytosol, mitochondrion, plastid	19.22	16.67
TraesCS1B01G400800.1	Wheat	endoplasmic reticulum	23.69	16.31
TraesCS1B01G003100.1	Wheat	endoplasmic reticulum	41.16	15.95
TraesCS3B01G349500.1	Wheat	cytosol	22.14	15.43
Zm00001d025455_P001	Maize	cytosol	21.94	15.03
Zm00001d000027_P028	Maize	nucleus	29.9	14.57
TraesCS7B01G417300.1	Wheat	cytosol, endoplasmic reticulum, nucleus	17.48	14.2
TraesCS1B01G400600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	33.59	13.57
TraesCS7B01G491700.1	Wheat	endoplasmic reticulum, plasma membrane	32.43	13.48
TraesCS7B01G490500.1	Wheat	extracellular	32.23	13.26
TraesCS7B01G490300.1	Wheat	extracellular, plasma membrane	30.49	12.35
TraesCS3B01G569900.1	Wheat	plasma membrane	58.64	12.34
TraesCS3B01G349800.1	Wheat	cytosol	12.62	11.32
TraesCS3B01G349600.2	Wheat	endoplasmic reticulum, extracellular	12.43	10.79
Os11t0682501-00	Rice	cytosol	7.18	9.66
TraesCS1B01G400700.1	Wheat	cytosol	5.63	7.84
TraesCS2B01G590100.1	Wheat	extracellular	0.78	2.96
TraesCS7B01G430200.1	Wheat	cytosol	0.97	1.11
Os11t0682600-01	Rice	endoplasmic reticulum, extracellular, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G016700.1	EnsemblPlantsGene:TraesCS6B01G016700	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	ncoils:Coil
PANTHER:PTHR23155	PANTHER:PTHR23155:SF861	SEG:seg	SUPFAM:SSF52047	MapMan:35.1	:

Description

No Description!

Coordinates

chr6B:-:10744852..10746514

Molecular Weight (calculated)

58854.0 Da

IEP (calculated)

6.404

GRAVY (calculated)

-0.166

Length

515 amino acids

Sequence
(BLAST)

001: MLNDTRGALW WSYQLLNPDI RRCFEFCNIF PRRSGFSRQE LVRLWIAGGF VKTSCSEKDM EDVAEDYIQE LLSCSFLQPV VDGSFGCDFT IHDLLHDLLD
101: KVTGSDYFRI ENETSQRGNK SWKGDIPQDV RHLFIRIYGG ELITDKILGL ENLRTLILYY GGKDTTVDEK FIECICKMLP NLRVLAIDLS WANTGPNFSL
201: PESISQLKHL RYLSFIAYSC MVILPIALAK LHHIQMLDFV DCEFLGFGST GLINLRHLFL RTKVKCPNIG RLVSLQTVPT FEVRNEQGYE VKQVSDLNKL
301: RGRLEISGLE NVTSKEEALE ANLAAKEGLT YFKLKWHGGD DSTRCSPEVE AEVLEGLRHP VGLEVLDIEH FKGSSYPDWM LSAQNGERKD PQLHTLRFSF
401: CGPRGPGPEL AAFPCLRVLV LYDCIWDALP DNLEQLKSLK LLIIHHCVNI KALPTLPHSL EEFCVNYGDA EFRKNCQTVG HPCWLKIKHI PKKEFAPTYI
501: SWDELRSRAP CSQFI

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.