Factsheet for TraesCS1D01G135500.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
plastid 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G132600.3	Wheat	cytosol, mitochondrion, plasma membrane, plastid	99.76	99.68
TraesCS1B01G154200.5	Wheat	cytosol, mitochondrion, plasma membrane, plastid	99.6	99.6
HORVU1Hr1G032310.10	Barley	mitochondrion	98.96	98.96
Os10t0412000-01	Rice	plasma membrane	47.63	92.37
Os10t0412050-00	Rice	cytosol, mitochondrion, peroxisome	22.25	92.03
KXG38553	Sorghum	plasma membrane	91.25	91.39
Zm00001d032980_P001	Maize	mitochondrion, plasma membrane	90.92	91.29
Zm00001d014188_P005	Maize	mitochondrion	91.08	91.23
KRG99203	Soybean	extracellular, plasma membrane, vacuole	13.73	87.24
KRH45809	Soybean	plastid	77.43	78.57
KRG99204	Soybean	plasma membrane	59.04	77.94
Solyc01g011100.2.1	Tomato	plasma membrane	61.2	75.82
GSMUA_Achr8P31870_001	Banana	plasma membrane	76.63	75.12
Solyc05g006640.2.1	Tomato	plasma membrane, plastid	73.49	74.94
AT1G59820.1	Thale cress	plastid	72.69	74.61
CDY24494	Canola	plastid	72.77	74.57
Bra035422.1-P	Field mustard	plasma membrane, plastid	72.37	74.52
Bra031711.1-P	Field mustard	plastid	72.61	74.34
CDY34893	Canola	plastid	72.61	74.34
CDY70011	Canola	cytosol	7.39	73.02
CDY07798	Canola	plastid	72.61	72.67
CDY65725	Canola	plasma membrane	27.63	70.64
Solyc01g011090.2.1	Tomato	plastid	13.73	68.67
CDY27294	Canola	plastid	60.16	64.9
GSMUA_Achr7P17570_001	Banana	mitochondrion	80.32	61.35
CDY33607	Canola	plastid	72.85	50.5
Bra017897.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	72.93	49.75
TraesCS7D01G231800.2	Wheat	mitochondrion	41.53	42.9
TraesCS7D01G362300.1	Wheat	mitochondrion	41.77	42.73
TraesCS1D01G004700.2	Wheat	plasma membrane	42.01	41.31
TraesCS4D01G176300.2	Wheat	plasma membrane	27.87	34.02
TraesCS3D01G193200.1	Wheat	plasma membrane	31.25	33.45
TraesCS2D01G276300.1	Wheat	plasma membrane	28.11	32.68
TraesCS2D01G212400.1	Wheat	plasma membrane	28.11	31.25
TraesCS4D01G172400.1	Wheat	cytosol, plastid	32.13	30.46
VIT_00s0189g00030.t01	Wine grape	extracellular, mitochondrion, plasma membrane	73.33	29.68
TraesCS4D01G176200.1	Wheat	cytosol, mitochondrion, plasma membrane	15.42	27.08

Protein Annotations

Gene3D:2.70.150.10	MapMan:24.1.2.4.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	MapMan:5.8.2.1.1.1	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004012	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005548
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0005886	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009987
GO:GO:0015914	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0048194
GO:GO:0048364	GO:GO:0048367	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299
InterPro:P-type_ATPase_IV	InterPro:P-type_ATPase_N	PFAM:PF00122	PFAM:PF13246	PFAM:PF16209	PFAM:PF16212
PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR24092	PANTHER:PTHR24092:SF85	InterPro:P_typ_ATPase	InterPro:P_typ_ATPase_c
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01652
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G135500	EnsemblPlants:TraesCS1D01G135500.2	TIGR:cd02073	SEG:seg	:

Description

No Description!

Coordinates

chr1D:+:178449815..178466870

Molecular Weight (calculated)

141052.0 Da

IEP (calculated)

8.220

GRAVY (calculated)

-0.096

Length

1245 amino acids

Sequence
(BLAST)

0001: MSSRIKEMVR VATARLGGEP SPRAGPSQPG RAESSRTARL GGGGASLRRQ PQPQAPTVRT IYCNDREANA PVAYKGNSVS TTKYSVLTFL PKGLFEQFRR
0101: VANLYFLMIS ILSTTPISPV HPVTNVVPLS LVLLVSLIKE AFEDWKRFQN DMSINNAHVD VLQGQKWESS PWKRLQVGDI VRIKQDSYFP ADLLFLSSTN
0201: ADGVCYIETA NLDGETNLKI RKALEKTWDY VLPEKASEFK GEIQCEQPNN SLYTFTGNLI VDKQTIPISP NQILLRGCSL RNTEYIVAVV IFTGHETKVM
0301: MNSMNVPSKR STLEKKLDKL ILALFATLFT MCVIGAIGSG VFINEKYFYL GLRGRVEDQF NPKNRLVVTI LTMFTLITLY STIIPISLYV SIEMIKFIQC
0401: AQFINNDLNM YHAESNTPAL ARTSNLNEEL GQVEYIFSDK TGTLTRNLME FFKCSIGGEI YGTGITEIEK GGAERAGVRI DDDEDKRSAT AVHEKGFNFD
0501: DTRIMRGAWR NEPNPEACME FFRCLAICHT VLPEGEETPE KITYQAASPD EAALVAAAKN FGFFFYRRTP TTVMVRESHV DRMGSMQDVA YEILNVLEFN
0601: STRKRQSVVC RFPNGKLVLY CKGADNVIYE RLADGNYDIK KTSREHLEQF GSAGLRTLCL AYRDLSMDQY KSWNEKFVQA KSSLRDRDKK LDEVAELIEK
0701: DLILIGCTAI EDKLQEGVPA CIETLSAAGI KIWVLTGDKM ETAINIAYAC SLVNNDTKQF IISSETDTIR EAEDRGDPVE IARVIKESVK QSLRSYLEEA
0801: RRSLSNTPER KLAFIIDGRC LMYALDPALR VNLLGLSLIC HSVVCCRVSP LQKAQVTSLV RKGARKITLS IGDGANDVSM IQAAHVGIGI SGQEGMQAVM
0901: ASDFAIAQFR YLTDLLLVHG RWSYLRLCKV ITYFFYKNLT FTLTQFWFTF QTGFSGQRFY DDWFQSLYNV IFTALPVIMV GLFDKDVSAS LSKKYPQLYQ
1001: EGIRNTFFKW KVIAVWGFFA FYQSIVFYYF TAAASQHGHG SSGKILGQWD VSTMAFTCVV VTVNLRLLMS CNSITRWHYF SVAGSIAAWF LFIFIYSAIM
1101: TSFDRQENVY FVIYVLMSTF FFYLTLILVP VIALFGDFLY LSLQRWLFPY DYQVVQEMHK DDPHEYSMIR LPERSHLSPE EARSYAISML PRENSKHTGF
1201: AFDSPGYESF FASQQGVCVP HKPWDVARRA SMKQQRQQPQ RTGRS

Best Arabidopsis Sequence Match ( AT1G59820.1 )
(BLAST)

0001: MVRSGSFSVD SSATHQRTPS RTVTLGHIQP QAPTYRTVYC NDRESNQPVR FKGNSISTTK YNVFTFLPKG LFEQFRRIAN IYFLGISCLS MTPISPVSPI
0101: TNVAPLSMVL LVSLIKEAFE DWKRFQNDMS INNSTVEILQ DQQWVSIPWR KLQVGDIVKI KKDGFFPADI LFMSSTNSDG ICYVETANLD GETNLKIRKA
0201: LERTWDYLVP EKAYEFKGEI QCEQPNNSLY TFTGNLVVQK QTLPLSPDQL LLRGCSLRNT EYIVGAVVFT GHETKVMMNA MNAPSKRSTL EKKLDKLIIT
0301: IFCVLVTMCL IGAIGCSIVT DREDKYLGLH NSDWEYRNGL MIGFFTFFTL VTLFSSIIPI SLYVSIEMIK FIQSTQFINR DLNMYHAETN TPASARTSNL
0401: NEELGQVEYI FSDKTGTLTR NLMEFFKCSI GGVSYGCGVT EIEKGIAQRH GLKVQEEQRS TGAIREKGFN FDDPRLMRGA WRNEPNPDLC KELFRCLAIC
0501: HTVLPEGDES PEKIVYQAAS PDEAALVTAA KNFGFFFYRR TPTMVYVRES HVEKMGKIQD VAYEILNVLE FNSTRKRQSV VCRFPDGRLV LYCKGADNVI
0601: FERLANGMDD VRKVTREHLE HFGSSGLRTL CLAYKDLNPE TYDSWNEKFI QAKSALRDRE KKLDEVAELI EKDLILIGST AIEDKLQEGV PTCIETLSRA
0701: GIKIWVLTGD KMETAINIAY ACNLINNEMK QFVISSETDA IREAEERGDQ VEIARVIKEE VKRELKKSLE EAQHSLHTVA GPKLSLVIDG KCLMYALDPS
0801: LRVMLLSLSL NCTSVVCCRV SPLQKAQVTS LVRKGAQKIT LSIGDGANDV SMIQAAHVGI GISGMEGMQA VMASDFAIAQ FRFLTDLLLV HGRWSYLRIC
0901: KVVMYFFYKN LTFTLTQFWF TFRTGFSGQR FYDDWFQSLF NVVFTALPVI VLGLFEKDVS ASLSKRYPEL YREGIRNSFF KWRVVAVWAT SAVYQSLVCY
1001: LFVTTSSFGA VNSSGKVFGL WDVSTMVFTC LVIAVNVRIL LMSNSITRWH YITVGGSILA WLVFAFVYCG IMTPHDRNEN VYFVIYVLMS TFYFYFTLLL
1101: VPIVSLLGDF IFQGVERWFF PYDYQIVQEI HRHESDASKA DQLEVENELT PQEARSYAIS QLPRELSKHT GFAFDSPGYE SFFASQLGIY APQKAWDVAR
1201: RASMRSRPKV PKK

Arabidopsis Description

ALA3Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178WFR7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.