Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G264700.1 | Wheat | cytosol | 93.04 | 71.49 |
| TraesCS2B01G284500.1 | Wheat | cytosol | 88.7 | 66.09 |
| Os07t0105900-01 | Rice | cytosol | 48.41 | 36.38 |
| Zm00001d007932_P001 | Maize | cytosol | 42.32 | 27.92 |
| EER97827 | Sorghum | cytosol | 47.83 | 27.64 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G258800.1 | EnsemblPlantsGene:TraesCS2A01G258800 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | ncoils:Coil | PANTHER:PTHR23155 | PFAM:PF00931 |
| SEG:seg | SUPFAM:SSF52540 | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2A:-:406767306..406768343
Molecular Weight (calculated)
38503.6 Da
IEP (calculated)
4.784
GRAVY (calculated)
-0.480
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQQSGNDLK AVMEKLLQAF EDEVDSELPH RAELDHIFRI LKANKEKIIS EPPEVGKKEK LPELLRSIGD ALQQCKARSK QQQSESDKAK SKKMTMPSVS
101: DCNPFKSRPS QLSVDPLLEQ TIAILGDVPP PSPSPDQDAG EEAVTEYYQW TTSYVDESRI YGWDKEANDV VDALVGKEGE EEDQVLFRTA GIAGIHGSGK
201: TALAQKVFVH DRIKDAFPLR LWVCVGPPDH EDRFNLLYRM LDNLGLDTAK VEDIVDKADV VVKAATDEDK IKSRIGVLLF ILYVTLYKTG YLIVFDDMRA
301: YSDWYSNLTL QPPKDGEWYE RLAYGLPKAG RAPCSSPAAA RTAPG
101: DCNPFKSRPS QLSVDPLLEQ TIAILGDVPP PSPSPDQDAG EEAVTEYYQW TTSYVDESRI YGWDKEANDV VDALVGKEGE EEDQVLFRTA GIAGIHGSGK
201: TALAQKVFVH DRIKDAFPLR LWVCVGPPDH EDRFNLLYRM LDNLGLDTAK VEDIVDKADV VVKAATDEDK IKSRIGVLLF ILYVTLYKTG YLIVFDDMRA
301: YSDWYSNLTL QPPKDGEWYE RLAYGLPKAG RAPCSSPAAA RTAPG
001: MPSKNLQQAV LTNEFTTNFI TTCKDWLDVN GLAKGNLEKK RDDNEEEERL KTESKLPGHD IHGFDNEIKS LQHFLLDQKV RREFKSLVIV GEYGVGKTAL
101: CQKIFNDEAV KSVYAPRVWV SMENKESKEG LDGKICVLKK ILKGLGVEEL ILETISTDAK QEFKDNEEVA SNQEAGEIDR ETEKEKELSA LLYALHLNLR
201: WKKYLIVFDD VRENDNWDEK LDAKLKEDEK WGKYLSDGFP KGSGGRVIYT TRDENLAKNL VAQKHEIHRL WPLSDHQSVW KIYDAVVKDK QKESPRNDKK
301: CIDELMNKSR GLPLAARLLA ERDPVFVDDE VGPVGSTHGQ TDSSNRQPAN QASS
101: CQKIFNDEAV KSVYAPRVWV SMENKESKEG LDGKICVLKK ILKGLGVEEL ILETISTDAK QEFKDNEEVA SNQEAGEIDR ETEKEKELSA LLYALHLNLR
201: WKKYLIVFDD VRENDNWDEK LDAKLKEDEK WGKYLSDGFP KGSGGRVIYT TRDENLAKNL VAQKHEIHRL WPLSDHQSVW KIYDAVVKDK QKESPRNDKK
301: CIDELMNKSR GLPLAARLLA ERDPVFVDDE VGPVGSTHGQ TDSSNRQPAN QASS
Arabidopsis Description
Probable disease resistance protein At5g45490 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.