Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G284500.1 | Wheat | cytosol | 49.24 | 48.81 |
| TraesCS2D01G264700.1 | Wheat | cytosol | 47.71 | 48.78 |
| TraesCS2A01G258800.1 | Wheat | cytosol | 36.38 | 48.41 |
| Zm00001d007932_P001 | Maize | cytosol | 41.39 | 36.33 |
| EER97827 | Sorghum | cytosol | 42.27 | 32.5 |
| Os01t0798900-00 | Rice | cytosol | 20.48 | 23.68 |
Protein Annotations
| EnsemblPlants:Os07t0105900-01 | EnsemblPlantsGene:Os07g0105900 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | ncoils:Coil | PANTHER:PTHR23155 | PFAM:PF00931 |
| ProteinID:BAC10378.1 | ProteinID:BAD31122.1 | ProteinID:BAD31940.1 | ProteinID:BAF20615.1 | ProteinID:BAS99710.1 | SEG:seg |
| SUPFAM:SSF52540 | UniParc:UPI00000A2259 | UniProt:Q8L4N7 | MapMan:35.1 | : | : |
Description
NB-ARC domain containing protein. (Os07t0105900-01)
Coordinates
chr7:-:333276..334779
Molecular Weight (calculated)
50811.1 Da
IEP (calculated)
5.116
GRAVY (calculated)
-0.461
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAGKGKGE VEGMEQKLEK LMSAFHDHQE GNKAVRHQKE LEELFSFLRE HEAAFSQLPG DKKDDLDALL RNIEGVLELC KNQEEKKKKT TNKMGDCIPF
101: KSSSRPPADH TSSTSVVAPL LMQARDILGD SSSSAPAAAG PNKKEVLYEW TTSYVDEKRL YGWDDEATEV ADALAGPEED DDELFRAAGI FGIHGSGKTA
201: LAQKVFVHDR IKDTFLLRLW VCVGPTPPDD DKQQQYEVKF SLLYRMLDNL GLDTYKVEEV VNGSEAVKKH SGDSDAAKES KIGVLLFILH VALAKTSYLI
301: VLDDIRAYDP WYTNLALPPP PHGEWSDRLA YGLPKLNKSA VLVTCRKEEH ARAMVRTGRV FHPPLLAVAD AWKLFEREYL QEAEKKQVGY NVKDDVLYND
401: LKVVQEEMVG KCLGLPVAIL EAAKGFAQYC TYVDDDDAKT TQPTTAKGAD AGDPAHAAA
101: KSSSRPPADH TSSTSVVAPL LMQARDILGD SSSSAPAAAG PNKKEVLYEW TTSYVDEKRL YGWDDEATEV ADALAGPEED DDELFRAAGI FGIHGSGKTA
201: LAQKVFVHDR IKDTFLLRLW VCVGPTPPDD DKQQQYEVKF SLLYRMLDNL GLDTYKVEEV VNGSEAVKKH SGDSDAAKES KIGVLLFILH VALAKTSYLI
301: VLDDIRAYDP WYTNLALPPP PHGEWSDRLA YGLPKLNKSA VLVTCRKEEH ARAMVRTGRV FHPPLLAVAD AWKLFEREYL QEAEKKQVGY NVKDDVLYND
401: LKVVQEEMVG KCLGLPVAIL EAAKGFAQYC TYVDDDDAKT TQPTTAKGAD AGDPAHAAA
001: MTQEDSSRGL TSVGRVDFTN RFADRYNEWL GTTGDETKQV EDRVETDSGL PGHDIYGFEN EIKSLQHFLL DQKSYKLFKS LVVVGEYGVG KTALCQQIFN
101: DYDVRNAYAP RIWVSMHSNE SKEGLDGKIC VLKTILKGLG VEESMFESIH REVVEEVSNR QEAGEIDGET AKEKEISALL YALHLNLRWK KYLIVFDDVQ
201: EIDNWDEKLD AKLNEGEKWG KYLSDGFPKG SGGRVIYTTR DENLAKNLVV QKHEIHRLWP LSDSNSVWKI YEAMIQKREK ESPRNDKKCI DELMNKSRGL
301: PLAARLLAEL DPMLFDDGKA NQNGSKDGKT DSVDNPNSEE SKTKPL
101: DYDVRNAYAP RIWVSMHSNE SKEGLDGKIC VLKTILKGLG VEESMFESIH REVVEEVSNR QEAGEIDGET AKEKEISALL YALHLNLRWK KYLIVFDDVQ
201: EIDNWDEKLD AKLNEGEKWG KYLSDGFPKG SGGRVIYTTR DENLAKNLVV QKHEIHRLWP LSDSNSVWKI YEAMIQKREK ESPRNDKKCI DELMNKSRGL
301: PLAARLLAEL DPMLFDDGKA NQNGSKDGKT DSVDNPNSEE SKTKPL
Arabidopsis Description
Probable disease resistance protein At5g45440 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.