Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G476500.1 | Wheat | cytosol | 90.62 | 90.62 |
| HORVU2Hr1G104980.1 | Barley | cytosol | 90.62 | 90.62 |
| TraesCS2A01G454700.1 | Wheat | cytosol | 85.42 | 85.42 |
| TraesCS2A01G454500.1 | Wheat | cytosol, extracellular | 81.25 | 77.23 |
| TraesCS2A01G453800.1 | Wheat | cytosol | 71.88 | 71.88 |
| TraesCS2A01G454000.1 | Wheat | cytosol | 71.88 | 71.13 |
| TraesCS2A01G454400.1 | Wheat | cytosol, nucleus, plastid | 56.25 | 71.05 |
| TraesCS2A01G453700.1 | Wheat | cytosol | 68.75 | 70.97 |
| TraesCS2A01G454300.1 | Wheat | cytosol | 70.83 | 70.83 |
| Zm00001d026028_P001 | Maize | cytosol | 69.79 | 69.79 |
| TraesCS2A01G453500.1 | Wheat | cytosol | 67.71 | 67.71 |
| TraesCS2A01G453900.1 | Wheat | cytosol | 68.75 | 67.35 |
| TraesCS2A01G454200.1 | Wheat | cytosol | 66.67 | 66.67 |
| EES12739 | Sorghum | vacuole | 67.71 | 63.73 |
| Zm00001d002522_P001 | Maize | cytosol | 63.54 | 60.4 |
| TraesCS2A01G453400.1 | Wheat | cytosol | 61.46 | 55.66 |
| TraesCS6A01G262100.1 | Wheat | extracellular, plastid | 42.71 | 38.32 |
| TraesCS2A01G453600.1 | Wheat | plastid | 71.88 | 35.57 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 32.29 | 31.63 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 31.25 | 30.93 |
| TraesCS2A01G454800.1 | Wheat | cytosol, nucleus, plastid | 35.42 | 27.64 |
| TraesCS7A01G385100.1 | Wheat | cytosol | 35.42 | 25.76 |
| TraesCS6A01G262000.1 | Wheat | nucleus | 31.25 | 23.81 |
| TraesCS6A01G261800.1 | Wheat | nucleus | 32.29 | 20.39 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 35.42 | 14.66 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G454600.1 | EnsemblPlantsGene:TraesCS2A01G454600 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF7 |
| PFAM:PF04570 | PFscan:PS51795 | SEG:seg | MapMan:27.3.3 | : | : |
Description
No Description!
Coordinates
chr2A:+:703402870..703403311
Molecular Weight (calculated)
10756.5 Da
IEP (calculated)
4.769
GRAVY (calculated)
-0.550
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MAASATCFFF FDTEPLGEPG MPTLDACALC SKPLARDSDI FMYRGDTPFC SEECRDEQMQ PDAICSRQAA RRQQRFSSGY DARRWHQDSG KVSVAS
001: MEVSMRKPYF IEEEDDGFVS LSEMEAGVSS PSCYNYPQSY YYNHHHHQYS VSSPRSGKFH DFRFDNSYYG YGQPHFLDSC FLCKKRLGDN RDIFMYRGDT
101: PFCSEECREE QIERDEAKEK KQSLSTSVKA MRRNEKRSSS SSPTRSRNYA FRTGTVAAA
101: PFCSEECREE QIERDEAKEK KQSLSTSVKA MRRNEKRSSS SSPTRSRNYA FRTGTVAAA
Arabidopsis Description
Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VZM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.