Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- golgi 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G481500.1 | Wheat | cytosol | 78.83 | 91.42 |
| TraesCS2D01G481800.1 | Wheat | mitochondrion | 76.02 | 89.49 |
| TraesCS2B01G508300.1 | Wheat | cytosol | 57.65 | 79.3 |
| TraesCS2B01G508400.1 | Wheat | cytosol, peroxisome, plastid | 65.56 | 76.04 |
| TraesCS2B01G508100.1 | Wheat | cytosol | 65.05 | 75.44 |
| TraesCS2B01G508000.1 | Wheat | cytosol | 65.05 | 75.44 |
| TraesCS2B01G508500.1 | Wheat | peroxisome | 63.27 | 73.81 |
| TraesCS2B01G508700.1 | Wheat | mitochondrion | 41.33 | 71.05 |
| Os04t0630800-01 | Rice | cytosol | 59.69 | 68.02 |
| Os04t0631000-00 | Rice | cytosol | 56.12 | 65.48 |
| TraesCS2B01G507600.1 | Wheat | cytosol | 53.57 | 61.22 |
| TraesCS2B01G612800.1 | Wheat | cytosol | 53.06 | 60.82 |
| TraesCS2B01G612700.1 | Wheat | cytosol | 53.06 | 60.82 |
| TraesCS2B01G507300.1 | Wheat | mitochondrion | 35.2 | 60.79 |
| TraesCS2B01G507500.1 | Wheat | mitochondrion | 52.55 | 60.23 |
| TraesCS2B01G606800.1 | Wheat | cytosol | 52.3 | 59.42 |
| TraesCS2B01G507700.1 | Wheat | cytosol | 52.04 | 59.3 |
| Os04t0630600-00 | Rice | plasma membrane | 51.28 | 56.3 |
| TraesCS2B01G055100.1 | Wheat | cytosol | 47.96 | 53.56 |
| VIT_00s0361g00040.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 44.13 | 51.18 |
| GSMUA_Achr8P01490_001 | Banana | cytosol | 45.92 | 50.99 |
| Os04t0630900-01 | Rice | cytosol | 33.16 | 50.98 |
| KRH41990 | Soybean | cytosol, extracellular | 43.37 | 50.45 |
| Solyc03g031470.2.1 | Tomato | golgi | 41.33 | 48.5 |
| KRH41993 | Soybean | golgi | 41.58 | 48.22 |
| PGSC0003DMT400013000 | Potato | extracellular | 41.33 | 47.93 |
| CDY32381 | Canola | cytosol | 39.29 | 44.64 |
| CDY52321 | Canola | cytosol | 38.27 | 44.38 |
| CDY25313 | Canola | cytosol | 38.27 | 44.38 |
| Bra031403.1-P | Field mustard | cytosol | 38.27 | 44.38 |
| CDY07276 | Canola | cytosol | 38.52 | 44.15 |
| Bra021318.1-P | Field mustard | cytosol | 38.78 | 44.06 |
| AT1G61720.1 | Thale cress | cytosol | 38.01 | 43.82 |
| HORVU2Hr1G108260.3 | Barley | cytosol | 43.37 | 40.57 |
| TraesCS7B01G350500.1 | Wheat | cytosol | 29.59 | 32.86 |
| TraesCS3B01G257900.2 | Wheat | plastid | 32.14 | 32.64 |
| TraesCS2B01G204500.1 | Wheat | mitochondrion | 26.79 | 31.16 |
| TraesCS2B01G200700.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 26.79 | 30.43 |
| TraesCS2B01G204600.1 | Wheat | golgi | 26.79 | 29.09 |
| TraesCS7B01G412700.1 | Wheat | plastid | 24.23 | 24.36 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G507800.2 | EnsemblPlantsGene:TraesCS2B01G507800 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF557 | PFAM:PF01370 |
| SEG:seg | SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:+:704295423..704297331
Molecular Weight (calculated)
42400.7 Da
IEP (calculated)
6.258
GRAVY (calculated)
-0.040
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAGERRKTA CVTGGSGYIA SALIKLLLVK GYAVKTTVRD PDDTEKNSHL KDLQGLGPLE IIRADLSEEG SFDQAVSGCD YVFLVAAPLN LMSADPERDQ
101: VEATVQGTLN AMRSCARAGT VKRVMLTSST AGVSRRPLQG DGHVLDESSW SDVEYLRANK PPTWGYSVSK VLAEKAASRF AEENGIDLVT VLPVFTLGAA
201: PVSKAASSVP VTLSLLSGDE AQLAILEGLQ SVTGTVSITH VEDLDRAEVF VAENESSSGR YICRSHNVTI LQLAGLMAQK YLQYNVNADR CVLLPLFQNK
301: CLAFSTKLRY ETKKVQIFHM HACSCGDGEL LTTCVFCRFR GCPEQSKVCI SSQKIVGEGF VFKYESLGEI LDDLVEYGRC RGSKSDSRIV VG
101: VEATVQGTLN AMRSCARAGT VKRVMLTSST AGVSRRPLQG DGHVLDESSW SDVEYLRANK PPTWGYSVSK VLAEKAASRF AEENGIDLVT VLPVFTLGAA
201: PVSKAASSVP VTLSLLSGDE AQLAILEGLQ SVTGTVSITH VEDLDRAEVF VAENESSSGR YICRSHNVTI LQLAGLMAQK YLQYNVNADR CVLLPLFQNK
301: CLAFSTKLRY ETKKVQIFHM HACSCGDGEL LTTCVFCRFR GCPEQSKVCI SSQKIVGEGF VFKYESLGEI LDDLVEYGRC RGSKSDSRIV VG
001: MADGGKMVCV TGASGYVASW IVKLLLLRGY TVRATVRDPS DEKKTEHLLA LDGAKEKLKL FKADLLEEGS FEQAIEGCDA VFHTASPVSL TVTDPQIELI
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
Arabidopsis Description
At1g09510 [Source:UniProtKB/TrEMBL;Acc:Q5PP57]
SUBAcon: [plastid,vacuole,cytosol]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.