Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G482200.1 | Wheat | peroxisome | 96.73 | 96.15 |
| TraesCS2D01G500300.2 | Wheat | peroxisome | 98.51 | 89.22 |
| TraesCS2B01G508700.1 | Wheat | mitochondrion | 55.65 | 82.02 |
| TraesCS2B01G508400.1 | Wheat | cytosol, peroxisome, plastid | 82.44 | 81.95 |
| TraesCS2B01G508100.1 | Wheat | cytosol | 81.25 | 80.77 |
| TraesCS2B01G508000.1 | Wheat | cytosol | 79.17 | 78.7 |
| TraesCS2B01G508300.1 | Wheat | cytosol | 66.37 | 78.25 |
| Os04t0630800-01 | Rice | cytosol | 72.62 | 70.93 |
| Os04t0631000-00 | Rice | cytosol | 67.86 | 67.86 |
| TraesCS2B01G507600.1 | Wheat | cytosol | 67.26 | 65.89 |
| TraesCS2B01G507300.1 | Wheat | mitochondrion | 44.35 | 65.64 |
| TraesCS2B01G612700.1 | Wheat | cytosol | 65.48 | 64.33 |
| TraesCS2B01G612800.1 | Wheat | cytosol | 65.48 | 64.33 |
| TraesCS2B01G507800.2 | Wheat | cytosol, golgi, mitochondrion, plastid | 73.81 | 63.27 |
| TraesCS2B01G606800.1 | Wheat | cytosol | 63.69 | 62.03 |
| TraesCS2B01G507500.1 | Wheat | mitochondrion | 63.1 | 61.99 |
| TraesCS2B01G507700.1 | Wheat | cytosol | 63.1 | 61.63 |
| Os04t0630600-00 | Rice | plasma membrane | 63.1 | 59.38 |
| TraesCS2B01G055100.1 | Wheat | cytosol | 58.63 | 56.13 |
| GSMUA_Achr8P01490_001 | Banana | cytosol | 55.06 | 52.41 |
| Os04t0630900-01 | Rice | cytosol | 39.58 | 52.16 |
| KRH41990 | Soybean | cytosol, extracellular | 51.79 | 51.63 |
| VIT_00s0361g00040.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 51.49 | 51.18 |
| KRH41993 | Soybean | golgi | 50.3 | 50.0 |
| Solyc03g031470.2.1 | Tomato | golgi | 48.81 | 49.1 |
| PGSC0003DMT400013000 | Potato | extracellular | 49.11 | 48.82 |
| CDY07276 | Canola | cytosol | 47.32 | 46.49 |
| CDY32381 | Canola | cytosol | 47.62 | 46.38 |
| AT1G61720.1 | Thale cress | cytosol | 46.73 | 46.18 |
| CDY25313 | Canola | cytosol | 46.43 | 46.15 |
| CDY52321 | Canola | cytosol | 46.13 | 45.86 |
| Bra031403.1-P | Field mustard | cytosol | 46.13 | 45.86 |
| Bra021318.1-P | Field mustard | cytosol | 47.02 | 45.8 |
| TraesCS7B01G350500.1 | Wheat | cytosol | 35.12 | 33.43 |
| TraesCS3B01G257900.2 | Wheat | plastid | 36.61 | 31.87 |
| TraesCS2B01G204500.1 | Wheat | mitochondrion | 30.06 | 29.97 |
| TraesCS2B01G200700.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 29.46 | 28.7 |
| TraesCS2B01G204600.1 | Wheat | golgi | 30.06 | 27.98 |
| TraesCS7B01G412700.1 | Wheat | plastid | 28.27 | 24.36 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G508500.1 | EnsemblPlantsGene:TraesCS2B01G508500 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF557 | PFAM:PF01370 |
| SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:704727850..704729854
Molecular Weight (calculated)
36360.7 Da
IEP (calculated)
5.107
GRAVY (calculated)
-0.003
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAEGRKTA CVTGGSGYIA AVLIKLLLEK AVKTTVRDPD DMEKNSHLKE LQALGPLEVI GAQLDVEGSF DKAVSGCDYA FLVAAPMNMD AADPEKDMIE
101: AAVQGTLNVM RSCVRAGTVK RVVLTSSDAA VSRRPLHGGG HVLDEGSWSD VEYLRTNKPP IWAYAVSKVL LEKAANKFAE ENGISLVTVL PVFTLGAAPL
201: SKAKTSVPLT LSLLSGDETF LNMLIGLQLI TDSMAISHVE DLCRAKVFLA ENESSSGRYI CCSHNTTVLQ LSRFLAEKYP QYNVQPERFD GSPEKPKVCL
301: SSDKLIGEGF VFKYNDLGEI FDNLVEYGRT TGILPY
101: AAVQGTLNVM RSCVRAGTVK RVVLTSSDAA VSRRPLHGGG HVLDEGSWSD VEYLRTNKPP IWAYAVSKVL LEKAANKFAE ENGISLVTVL PVFTLGAAPL
201: SKAKTSVPLT LSLLSGDETF LNMLIGLQLI TDSMAISHVE DLCRAKVFLA ENESSSGRYI CCSHNTTVLQ LSRFLAEKYP QYNVQPERFD GSPEKPKVCL
301: SSDKLIGEGF VFKYNDLGEI FDNLVEYGRT TGILPY
001: MADGGKMVCV TGASGYVASW IVKLLLLRGY TVRATVRDPS DEKKTEHLLA LDGAKEKLKL FKADLLEEGS FEQAIEGCDA VFHTASPVSL TVTDPQIELI
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
Arabidopsis Description
At1g09510 [Source:UniProtKB/TrEMBL;Acc:Q5PP57]
SUBAcon: [plastid,vacuole,cytosol]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.