Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G396700.1 | Wheat | cytosol | 1.83 | 0.14 |
| TraesCS2A01G110900.4 | Wheat | nucleus | 1.83 | 0.13 |
| TraesCS2D01G111500.3 | Wheat | nucleus | 1.83 | 0.13 |
| TraesCS2D01G530200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 0.92 | 0.08 |
| TraesCS6D01G394400.1 | Wheat | nucleus, plastid | 0.92 | 0.07 |
| TraesCS2B01G129800.1 | Wheat | nucleus | 0.92 | 0.07 |
| TraesCS2D01G466000.1 | Wheat | cytosol, plasma membrane | 0.92 | 0.06 |
| TraesCS2D01G465400.1 | Wheat | endoplasmic reticulum, golgi | 0.92 | 0.06 |
| TraesCS5D01G544700.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS5D01G561300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS5D01G561200.1 | Wheat | extracellular | 0.0 | 0.0 |
| TraesCS5D01G560500.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS5D01G549400.1 | Wheat | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| TraesCS4D01G366300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS5D01G544500.2 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS5D01G544300.4 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS5D01G542500.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS5D01G540600.1 | Wheat | peroxisome | 0.0 | 0.0 |
| TraesCS5D01G419800.1 | Wheat | mitochondrion | 0.0 | 0.0 |
| TraesCS5D01G419700.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS4D01G366400.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS3D01G516300.1 | Wheat | plasma membrane | 0.0 | 0.0 |
| TraesCS6D01G060400.1 | Wheat | plasma membrane | 0.0 | 0.0 |
| TraesCS6D01G117500.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 0.0 | 0.0 |
| TraesCS6D01G394100.2 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS6D01G394300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS6D01G396000.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS6D01G396600.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS6D01G396800.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7D01G010700.1 | Wheat | nucleus, plasma membrane | 0.0 | 0.0 |
| TraesCS7D01G537100.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7D01G542100.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7D01G542200.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7D01G546100.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7D01G546400.1 | Wheat | extracellular, plasma membrane | 0.0 | 0.0 |
| TraesCS7D01G546500.1 | Wheat | extracellular | 0.0 | 0.0 |
| TraesCS7D01G555300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS2D01G465300.1 | Wheat | endoplasmic reticulum | 0.0 | 0.0 |
| KXG22476 | Sorghum | cytosol, plasma membrane, plastid | 0.0 | 0.0 |
| KXG22479 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 0.0 | 0.0 |
| KXG22480 | Sorghum | cytosol | 0.0 | 0.0 |
| OQU78392 | Sorghum | cytosol | 0.0 | 0.0 |
| Os04t0623066-01 | Rice | extracellular, vacuole | 0.0 | 0.0 |
| TraesCS1D01G029900.1 | Wheat | endoplasmic reticulum, golgi | 0.0 | 0.0 |
| TraesCS1D01G093400.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS1D01G093500.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS1D01G099000.1 | Wheat | plastid | 0.0 | 0.0 |
| TraesCS1D01G099100.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS1D01G380300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS2D01G002400.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS2D01G003600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 0.0 | 0.0 |
| TraesCS2D01G004900.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS2D01G056800.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS4D01G006000.1 | Wheat | cytosol, plasma membrane | 0.0 | 0.0 |
| TraesCS2D01G465500.1 | Wheat | cytosol, extracellular, nucleus | 0.0 | 0.0 |
| TraesCS2D01G465600.1 | Wheat | extracellular | 0.0 | 0.0 |
| TraesCS2D01G466400.2 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS2D01G466600.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS2D01G473400.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS2D01G473500.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS3D01G032300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS3D01G039500.1 | Wheat | extracellular | 0.0 | 0.0 |
| TraesCS3D01G446200.1 | Wheat | plasma membrane | 0.0 | 0.0 |
| TraesCS3D01G515400.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS3D01G515500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| HORVU2Hr1G019120.1 | Barley | cytosol | 0.0 | 0.0 |
| TraesCS3D01G542500.1 | Wheat | cytosol, extracellular, nucleus | 0.0 | 0.0 |
| TraesCS4D01G004000.1 | Wheat | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G111600.1 | EnsemblPlantsGene:TraesCS2D01G111600 | InterPro:DUF3681 | PANTHER:PTHR33530 | PANTHER:PTHR33530:SF3 | PFAM:PF12442 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2D:-:62028399..62028728
Molecular Weight (calculated)
11957.0 Da
IEP (calculated)
10.204
GRAVY (calculated)
0.643
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAGRDCTK LPLALIPGGV FQAAAALRLF VFKKPDGMFL HHGKVAFYLY YALLTAVALF GFVEASLGFW VARDLHDRRR QTYGKVAMVV SLLFLVLVGG
101: LGGFAMPKY
101: LGGFAMPKY
001: MANDQEMSGW TDLLHSSTKL LEQAAPSSQF PPLQRNLDQL EALSRKLKAK TLRNEAPSQS IAATRLLARE GINADQLSRD LKSFELKTTF EDVFPAETTS
101: VEEYLQQVHE MAMVSAIQEA QKDNVRSFNN YMLKVLEEDC IKEKRDFLHS LSKTSMLPKT KMINSSRGSH AGSLVPLSPQ VSSKPGTELV SMTNKPIHEK
201: KAYVYAEVVK KLNSARERGL PFKLATLFNG AYESLEIDLT RGKSVNMQKL WQLIQGMTGE ESAVQHGVSK RMALVIGARR HLECGHGKHI MDTIQSHPTQ
301: AALGGSVGNL QRIRAFLRIR LRDYGSLDFD SVDARRQPPV DTTWQQIYFC LRTGYYEEAR EIAQSSRSSQ QQFAPLLTEW ITTGGTVAAQ TAATASEECE
401: KLLRMGDRFG QTTYDKKKLL LYTIISGSRR QIDRIMRDFS TLFNTIEDFL WFKLSCVRDV AGGSSSMIVN DGLVPYSLDD LQAYLNKFEP SYYTKNGKDP
501: LVYPYVLLLS IQLLPAIMHM SNEAGDEGYN IDAVHVAISL VDHSILSEGS GTGRKLSVMD ANAEASSMIR QYGSMYLHHG DLQMTLEYYA QAAIAVGGGQ
601: QAWSGRSNVD QQRQRNLMLK QLLTEILSQE DGIHFLLGAR GSGEEGELGR FLPDIKLRQQ FLIEAAHQFQ EAGLYDKSIE LQKRVGAFSS ALETINKCLS
701: EAICSLVRGR PDGESRTEGL VLSGNDILNS YKYHPDVSAQ ERHLVMEQET ILRELEAILS IHKLARLNKH LDAIREVAKL PFLHLDPRQP DTTSDEFQKA
801: SSYFQTCVPD LLKVALTCLD NVADTDGSIR GMRSKIAGFL ASNTQRNWPR DLYEKIARSF
101: VEEYLQQVHE MAMVSAIQEA QKDNVRSFNN YMLKVLEEDC IKEKRDFLHS LSKTSMLPKT KMINSSRGSH AGSLVPLSPQ VSSKPGTELV SMTNKPIHEK
201: KAYVYAEVVK KLNSARERGL PFKLATLFNG AYESLEIDLT RGKSVNMQKL WQLIQGMTGE ESAVQHGVSK RMALVIGARR HLECGHGKHI MDTIQSHPTQ
301: AALGGSVGNL QRIRAFLRIR LRDYGSLDFD SVDARRQPPV DTTWQQIYFC LRTGYYEEAR EIAQSSRSSQ QQFAPLLTEW ITTGGTVAAQ TAATASEECE
401: KLLRMGDRFG QTTYDKKKLL LYTIISGSRR QIDRIMRDFS TLFNTIEDFL WFKLSCVRDV AGGSSSMIVN DGLVPYSLDD LQAYLNKFEP SYYTKNGKDP
501: LVYPYVLLLS IQLLPAIMHM SNEAGDEGYN IDAVHVAISL VDHSILSEGS GTGRKLSVMD ANAEASSMIR QYGSMYLHHG DLQMTLEYYA QAAIAVGGGQ
601: QAWSGRSNVD QQRQRNLMLK QLLTEILSQE DGIHFLLGAR GSGEEGELGR FLPDIKLRQQ FLIEAAHQFQ EAGLYDKSIE LQKRVGAFSS ALETINKCLS
701: EAICSLVRGR PDGESRTEGL VLSGNDILNS YKYHPDVSAQ ERHLVMEQET ILRELEAILS IHKLARLNKH LDAIREVAKL PFLHLDPRQP DTTSDEFQKA
801: SSYFQTCVPD LLKVALTCLD NVADTDGSIR GMRSKIAGFL ASNTQRNWPR DLYEKIARSF
Arabidopsis Description
NUP93BNuclear pore complex protein NUP93B [Source:UniProtKB/Swiss-Prot;Acc:F4J284]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.