Factsheet for TraesCS6D01G117500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol

Predictor Summary:

endoplasmic reticulum 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plastid
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G127200.1	Wheat	mitochondrion	22.4	96.09
TraesCS6B01G155500.1	Wheat	cytosol	61.98	91.36
TraesCS1D01G093500.1	Wheat	cytosol	40.1	54.51
TraesCS2D01G002400.1	Wheat	cytosol	38.02	42.69
TraesCS1D01G099000.1	Wheat	plastid	20.31	39.2
TraesCS7D01G546500.1	Wheat	extracellular	23.05	37.9
TraesCS4D01G366400.1	Wheat	cytosol	33.07	36.6
TraesCS2D01G003600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	17.32	35.95
TraesCS3D01G516300.1	Wheat	plasma membrane	63.41	34.18
TraesCS5D01G419800.1	Wheat	mitochondrion	18.1	33.33
TraesCS4D01G006000.1	Wheat	cytosol, plasma membrane	57.68	28.29
TraesCS5D01G561200.1	Wheat	extracellular	34.64	28.06
KXG27159	Sorghum	cytosol	57.68	27.84
TraesCS2D01G473500.1	Wheat	cytosol	55.73	27.37
Os12t0481400-00	Rice	cytosol	52.86	26.99
TraesCS4D01G004000.1	Wheat	extracellular	55.86	26.9
Os12t0482100-00	Rice	cytosol	53.26	26.84
Os12t0481700-00	Rice	cytosol	53.26	26.84
TraesCS1D01G099100.1	Wheat	cytosol	25.78	26.68
TraesCS6D01G060400.1	Wheat	plasma membrane	54.3	25.74
OQU82377	Sorghum	cytosol	52.73	25.6
TraesCS1D01G029900.1	Wheat	endoplasmic reticulum, golgi	35.42	25.44
TraesCS7D01G546400.1	Wheat	extracellular, plasma membrane	47.4	24.93
TraesCS6D01G394300.1	Wheat	cytosol	14.84	24.52
TraesCS3D01G515400.1	Wheat	cytosol	28.78	24.26
TraesCS7D01G537100.1	Wheat	cytosol	31.77	23.87
TraesCS7D01G546100.1	Wheat	cytosol	44.27	22.83
TraesCS2D01G530200.1	Wheat	cytosol, nucleus, plasma membrane, plastid	36.33	21.92
TraesCS2D01G465500.1	Wheat	cytosol, extracellular, nucleus	32.29	21.83
TraesCS6D01G396800.1	Wheat	cytosol	37.63	21.08
TraesCS6D01G396700.1	Wheat	cytosol	38.54	20.86
TraesCS2D01G004900.1	Wheat	cytosol	35.16	20.67
TraesCS6D01G396600.1	Wheat	cytosol	36.33	20.42
TraesCS5D01G540600.1	Wheat	peroxisome	10.29	19.8
TraesCS7D01G542200.1	Wheat	cytosol	34.64	19.43
TraesCS5D01G542500.1	Wheat	cytosol	35.68	19.41
TraesCS5D01G561300.1	Wheat	cytosol	35.16	19.35
TraesCS5D01G549400.1	Wheat	endoplasmic reticulum, extracellular	34.51	19.15
TraesCS5D01G560500.1	Wheat	cytosol	34.9	18.77
TraesCS3D01G039500.1	Wheat	extracellular	32.42	17.58
TraesCS2D01G465600.1	Wheat	extracellular	28.78	15.81
TraesCS6D01G394100.2	Wheat	nucleus	28.39	15.19
TraesCS6D01G394400.1	Wheat	nucleus, plastid	28.78	15.06
TraesCS2D01G465300.1	Wheat	endoplasmic reticulum	31.64	15.02
TraesCS3D01G515500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	30.21	14.99
TraesCS3D01G446200.1	Wheat	plasma membrane	27.6	14.85
TraesCS2D01G111500.3	Wheat	nucleus	28.78	14.6
TraesCS2D01G465400.1	Wheat	endoplasmic reticulum, golgi	31.51	14.46
TraesCS7D01G010700.1	Wheat	nucleus, plasma membrane	26.17	13.89
TraesCS5D01G544700.1	Wheat	nucleus	28.52	13.86
TraesCS2D01G466000.1	Wheat	cytosol, plasma membrane	28.91	13.81
TraesCS5D01G544500.2	Wheat	cytosol	27.47	13.44
TraesCS2D01G466600.1	Wheat	nucleus	24.74	13.01
TraesCS5D01G544300.4	Wheat	nucleus	27.99	12.87
TraesCS2D01G466400.2	Wheat	cytosol	14.45	12.04
TraesCS6D01G396000.1	Wheat	cytosol	8.2	7.89
TraesCS2D01G473400.1	Wheat	cytosol	2.21	2.39
TraesCS3D01G032300.1	Wheat	cytosol	1.04	1.18
TraesCS7D01G555300.1	Wheat	cytosol	0.78	1.18
TraesCS7D01G542100.1	Wheat	cytosol	0.52	0.73
TraesCS4D01G366300.1	Wheat	cytosol	0.13	0.18
TraesCS5D01G419700.1	Wheat	cytosol	0.0	0.0
TraesCS3D01G542500.1	Wheat	cytosol, extracellular, nucleus	0.0	0.0
TraesCS2D01G111600.1	Wheat	extracellular, plasma membrane	0.0	0.0
TraesCS2D01G056800.1	Wheat	cytosol	0.0	0.0
TraesCS1D01G380300.1	Wheat	cytosol	0.0	0.0
TraesCS1D01G093400.1	Wheat	extracellular, golgi	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6D01G117500.1	EnsemblPlantsGene:TraesCS6D01G117500	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PANTHER:PTHR44634	PANTHER:PTHR44634:SF3	PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52058
SUPFAM:SSF52540	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:83160857..83164691

Molecular Weight (calculated)

87687.1 Da

IEP (calculated)

7.200

GRAVY (calculated)

-0.221

Length

768 amino acids

Sequence
(BLAST)

001: MRWVLQLVEA GAEGWYSILS DSVQPHLSGI LPQDLKPQRL VLQHLNPLTS SATMATAISA AVWALRKALA PITDDLPKDW AASDSLGPNI NALKMELLRV
101: QGILYNAHDR EITNPALQDL LHMLRQLADG AEDVLDELDY FRIQDKLDST YHAADKHAKG CTHGLALNAR HTARAVANKF KFSSGGNKQT PKLKFDRVDM
201: SKRMADIVQQ LDPICAKVKE ILDLELRNQK PAQGNNRPKT TSAIIEPELF GRNVQKKNIV DDITHGKYYA NGLTVLQIVG PGGIGKMTFT QHVYQEVNIL
301: FDIMIWICVS LNFDANRLTQ KIVKKIPKVN AENENAIEGE LIEQRLKHKR FLLVLDEWKK LLAPFRKGEA RGNMVIVTTR IPEAVTMVKT VDYSIELNRL
401: GTEDFMHLFE ACVFGHEQPW KDYPELLGVG KSIVGHLKGF PLAAKTVGRL LRNQLSLDNW TRVLESKEWE LQTSDYDIMP ALKLSYDYLP FHLQQCFSYG
501: ALFPEDYEFG GTELVQLWIG LDILDSCDER KRLEDVGLCY LNDLVNRGFF KKNEKEDGSS CYVMHDLLHE LAVKVSSSEC LSISSSNVRY IQSPPSVRHL
601: SIIIGDRDVN DRMTFEDFKR DLSTLDEKLK IENLKTLMLF GEYQGCFAQT LGVLFAEAKS LRVILLSGAS YRYVVEDVFR SLPRLIHLRY LRITPFARLN
701: SNISRFYHLR VLDVEQYSVQ LDFPRDMSNL TKLRHFLVRD IDLQYINSDV GKLELLQDLR SFMVKREI

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.