Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G354100.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS2D01G413300.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS2D01G414900.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS3D01G150200.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS3D01G340800.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS3D01G348200.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS4D01G225600.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS4D01G345400.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS5D01G224000.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS5D01G224700.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS5D01G308500.1 | Wheat | nucleus | 100.0 | 81.55 |
| Bra020297.1-P | Field mustard | nucleus | 100.0 | 81.55 |
| TraesCS5D01G354200.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS5D01G354700.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS5D01G360900.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS6D01G061700.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS6D01G062100.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS6D01G062900.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS6D01G063300.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS6D01G241500.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS7D01G181000.1 | Wheat | nucleus | 100.0 | 81.55 |
| VIT_13s0019g00760.t01 | Wine grape | nucleus | 100.0 | 81.55 |
| TraesCS1D01G364400.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS1D01G081600.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS1D01G204700.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS1D01G262000.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS1D01G286600.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS1D01G286700.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS1D01G290000.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS1D01G290100.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS1D01G290200.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS1D01G366500.1 | Wheat | nucleus | 100.0 | 81.55 |
| TraesCS1D01G368000.1 | Wheat | nucleus | 100.0 | 81.55 |
| Os01t0835900-00 | Rice | nucleus | 100.0 | 81.55 |
| EER96771 | Sorghum | nucleus | 100.0 | 81.55 |
| TraesCS2D01G391500.1 | Wheat | nucleus | 100.0 | 81.55 |
| CDX86050 | Canola | nucleus | 100.0 | 81.55 |
| TraesCS2B01G436600.1 | Wheat | nucleus | 100.0 | 80.77 |
| Bra000006.1-P | Field mustard | nucleus | 98.81 | 80.58 |
| TraesCS2D01G413100.1 | Wheat | extracellular, golgi, nucleus | 98.81 | 80.58 |
| TraesCS2D01G413200.1 | Wheat | nucleus | 96.43 | 78.64 |
| TraesCS2D01G469600.1 | Wheat | nucleus | 89.29 | 75.76 |
| TraesCS2D01G212700.1 | Wheat | nucleus | 84.52 | 68.93 |
| HORVU6Hr1G011510.1 | Barley | nucleus, plastid | 100.0 | 59.57 |
| HORVU5Hr1G087870.1 | Barley | nucleus, plastid | 100.0 | 56.0 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.5 | InterPro:CENP-T/H4_C | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:Histone_H4 | InterPro:IPR009072 | PFAM:PF15511 |
| PRINTS:PR00623 | PANTHER:PTHR10484 | PANTHER:PTHR10484:SF160 | SMART:SM00417 | SUPFAM:SSF47113 | EnsemblPlantsGene:TraesCS2D01G415000 |
| EnsemblPlants:TraesCS2D01G415000.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:528998896..528999200
Molecular Weight (calculated)
9280.5 Da
IEP (calculated)
11.747
GRAVY (calculated)
-0.381
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MSGRGKGGKG LGKPAIRRLA RRGGVKRISG LIYEETRGVL KIFLENVIRD AVTYTEHARR KTVTAMDVVY ALKRQGRTLY GFGG
1: MSGRGKGGKG LGKGGPAIRR LARRGGVKRI SGLIYEETRG VLKIFLENVI RDAVTYTEHA RRKTVTAMDV VYALKRQGRT LYGFGG
Arabidopsis Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.