Factsheet for TraesCS2D01G583000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

nucleus: 26228564

msms PMID: 26228564 doi

E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre

Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G615800.1	Wheat	extracellular	90.03	88.73
TraesCS2A01G571300.1	Wheat	plastid	90.03	82.97
TraesCS3D01G419900.1	Wheat	extracellular	72.73	79.74
TraesCS2D01G582900.1	Wheat	extracellular	76.54	75.87
TraesCS2D01G583200.1	Wheat	extracellular	61.29	61.29
TraesCS2D01G583100.1	Wheat	extracellular	60.12	60.12
Os04t0689000-01	Rice	extracellular	58.36	58.88
Os04t0688500-01	Rice	extracellular	57.77	55.97
Os04t0688600-01	Rice	extracellular	54.84	55.82
Zm00001d002901_P001	Maize	extracellular	55.43	54.94
Os04t0688300-01	Rice	extracellular	51.32	51.47
TraesCS1D01G130200.1	Wheat	extracellular	50.73	49.71
EES13153	Sorghum	extracellular	50.44	49.71
TraesCS2D01G584600.1	Wheat	extracellular	45.75	46.02
TraesCS2D01G584700.1	Wheat	extracellular	44.87	44.87
TraesCS2D01G583900.1	Wheat	extracellular	43.7	43.95
TraesCS2D01G584000.1	Wheat	vacuole	43.11	43.11
TraesCS2D01G584100.1	Wheat	extracellular	41.06	42.3
EES13152	Sorghum	extracellular	42.82	40.22
TraesCS2D01G583700.1	Wheat	extracellular	39.59	39.47
TraesCS2D01G584800.1	Wheat	extracellular	26.98	39.32
TraesCS3D01G518200.1	Wheat	extracellular	38.42	36.59
TraesCS3D01G517800.1	Wheat	extracellular	37.83	35.93
TraesCS3D01G031800.1	Wheat	extracellular	35.48	35.91
TraesCS7D01G066400.1	Wheat	golgi	37.54	35.75
TraesCS3D01G517000.1	Wheat	extracellular	35.78	33.7
TraesCS3D01G516900.1	Wheat	extracellular	34.9	32.6
GSMUA_Achr9P29540_001	Banana	extracellular	31.09	32.42

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF34	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G583000
EnsemblPlants:TraesCS2D01G583000.1	TIGR:cd00693	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:+:643435148..643436173

Molecular Weight (calculated)

36014.8 Da

IEP (calculated)

5.685

GRAVY (calculated)

0.113

Length

341 amino acids

Sequence
(BLAST)

001: MASSSAILAV LVTAAALLSP AMSLPVFTGD ASPDFHAASC TQLDGIVWSS VEAALRQEVA VAAGMLRLYF HDCFPQGCDA SILLNNTAAR ETALGPNLTI
101: QPRAMQLIES IRARAHAVCG PVVSCADITL LATRDIIVIS GGPWFNVPQG NLDSLAPAAQ AKVFDLPAPN TASVATLVES FGTRGLGDVA DLVALSGAHT
201: IGRSQCGSFE DRSQRADDTF SRKLAANCSK HPDRLQNLDV ITPDLFDNAY YKALGFNQGV FTSDMALVKN KTTAPIVKRF AESKEAFFGQ FARSMEKLAR
301: VPKPAGNVGE IRRFSCFRTN AQGTDAAVDA AVEEEGFAAS A

Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)

001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI

Arabidopsis Description

PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.