Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002902_P001 Maize extracellular 57.8 74.07
HORVU2Hr1G125110.2 Barley extracellular 53.76 54.55
TraesCS2A01G571500.1 Wheat extracellular 53.47 54.25
TraesCS2D01G583100.1 Wheat extracellular 53.47 54.25
TraesCS2B01G615700.1 Wheat extracellular 53.47 54.25
Os04t0689000-01 Rice extracellular 52.89 54.14
Os04t0688600-01 Rice extracellular 51.45 53.13
TraesCS2D01G583200.1 Wheat extracellular 52.31 53.08
TraesCS2A01G571700.1 Wheat nucleus 52.02 52.79
TraesCS2B01G615600.1 Wheat extracellular 52.02 52.79
TraesCS3A01G425000.1 Wheat cytosol, mitochondrion, plastid 35.55 51.46
TraesCS2D01G583000.1 Wheat nucleus 49.71 50.44
TraesCS2B01G615900.1 Wheat extracellular 49.71 50.44
Os04t0688300-01 Rice extracellular 49.13 50.0
Os04t0688500-01 Rice extracellular 50.87 50.0
TraesCS2B01G615800.1 Wheat extracellular 50.0 50.0
HORVU2Hr1G125120.1 Barley cytosol 22.54 49.68
TraesCS3D01G419900.1 Wheat extracellular 43.93 48.87
TraesCS2D01G582900.1 Wheat extracellular 48.55 48.84
EES13151 Sorghum extracellular 47.69 47.55
TraesCS3B01G461400.1 Wheat extracellular 42.77 46.98
TraesCS2A01G571300.1 Wheat plastid 49.71 46.49
EES13152 Sorghum extracellular 47.11 44.9
EES13148 Sorghum extracellular 46.82 44.75
HORVU4Hr1G090540.1 Barley extracellular 40.46 42.55
OQU82629 Sorghum extracellular 24.86 40.57
TraesCS3B01G461300.1 Wheat extracellular, plasma membrane 37.86 37.43
GSMUA_Achr9P29540_001 Banana extracellular 34.39 36.39
EES02106 Sorghum extracellular, plastid 37.57 35.91
EES02102 Sorghum extracellular 36.99 33.95
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1EntrezGene:8055468UniProt:C5YB27
EnsemblPlants:EES13153ProteinID:EES13153ProteinID:EES13153.1GO:GO:0003674GO:GO:0003824GO:GO:0004601
GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0006950
GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009505GO:GO:0009506
GO:GO:0009664GO:GO:0009987GO:GO:0016043GO:GO:0016491GO:GO:0020037GO:GO:0030312
GO:GO:0042744GO:GO:0046872GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016PFAM:PF00141PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435ScanProsite:PS00436
PFscan:PS50873PANTHER:PTHR31235PANTHER:PTHR31235:SF34MetaCyc:PWY-5461MetaCyc:PWY-5466MetaCyc:PWY-5469
MetaCyc:PWY-6824MetaCyc:PWY-7214MetaCyc:PWY-7445InterPro:Peroxidase_plnInterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BS
EnsemblPlantsGene:SORBI_3006G277800SUPFAM:SSF48113unigene:Sbi.16944InterPro:Secretory_peroxidaseSignalP:SignalP-noTMUniParc:UPI0001A87648
RefSeq:XP_002448825.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr6:-:60874713..60876219
Molecular Weight (calculated)
35838.6 Da
IEP (calculated)
6.614
GRAVY (calculated)
0.157
Length
346 amino acids
Sequence
(BLAST)
001: MAAAVMAIGL LLAGAVVGAV VPPHHDHLQL VIDTDGGLSL DFHAASCPQL EGIVRAAVQA ERGQDVQVTA GLLRIFFHDC LPQGCDASIL LDGEKAFGPN
101: ASLQPRALQL IESIRAKVHA VCGATVSCAD IIALATRDAV SLAGGPSIAM PQGRTDSLRP ATNAEVNTLP SPFSDVSTLL GTFSRRGLAD PADLVALSGG
201: HTVGKASCGF IRGNDDFSRR LAANCSAGRT GKQSLDVITP DAFDNRYFVA LRSTQGVLLS DQGLAGDRRT ARFVTAFASN QAAFFNQFAK SMVKLGSIKA
301: TAAGEIRRNC FRPNGRVSFD DVSALTLTGD DAAAVATSDE GFAASA
Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)
001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI
Arabidopsis Description
PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.