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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002898_P001 Maize extracellular 58.96 35.21
Os04t0688100-01 Rice extracellular 50.94 31.21
EES13148 Sorghum extracellular 51.89 30.39
TraesCS2A01G573900.1 Wheat extracellular 46.7 29.03
TraesCS2B01G614100.1 Wheat extracellular 46.7 29.03
TraesCS2B01G613900.1 Wheat extracellular, vacuole 45.75 28.45
HORVU2Hr1G124930.1 Barley extracellular 45.28 28.15
TraesCS2A01G573500.1 Wheat golgi 45.28 28.15
TraesCS2D01G584700.1 Wheat extracellular 44.81 27.86
HORVU2Hr1G124970.2 Barley extracellular 44.81 27.78
TraesCS2D01G584600.1 Wheat extracellular 43.87 27.43
TraesCS2B01G614400.1 Wheat extracellular 43.87 27.43
TraesCS2A01G573400.1 Wheat extracellular 43.4 27.14
HORVU2Hr1G124960.3 Barley plasma membrane 46.7 27.12
TraesCS2B01G614000.1 Wheat extracellular, vacuole 41.04 25.44
TraesCS2B01G613400.1 Wheat extracellular 41.04 25.07
TraesCS2B01G613500.1 Wheat extracellular 41.04 25.07
TraesCS2A01G574400.1 Wheat extracellular 40.57 24.86
EES13153 Sorghum extracellular 40.57 24.86
HORVU7Hr1G011840.2 Barley extracellular 38.68 24.05
TraesCS2A01G573700.1 Wheat extracellular 38.21 24.04
TraesCS3B01G034300.1 Wheat extracellular 38.21 24.04
TraesCS3D01G031800.1 Wheat extracellular 36.32 22.85
EES02106 Sorghum extracellular, plastid 36.32 21.27
GSMUA_Achr9P29540_001 Banana extracellular 32.08 20.8
EES13151 Sorghum extracellular 33.49 20.46
EES13152 Sorghum extracellular 33.49 19.56
EES02102 Sorghum extracellular 33.49 18.83
TraesCS2A01G573600.1 Wheat cytosol 16.04 13.99
TraesCS2D01G584800.1 Wheat extracellular 12.74 11.54
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.520.10MapMan:35.1UniProt:A0A1Z5RGB2GO:GO:0003674GO:GO:0003824
GO:GO:0004601GO:GO:0005488GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0020037GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016EnsemblPlants:OQU82629ProteinID:OQU82629ProteinID:OQU82629.1PFAM:PF00141PRINTS:PR00461
ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31235PANTHER:PTHR31235:SF79InterPro:Peroxidase_plnInterPro:Peroxidases_AS
EnsemblPlantsGene:SORBI_3006G277550SUPFAM:SSF48113SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B8B9E5DSEG:seg
Description
hypothetical protein
Coordinates
chr6:-:60839229..60840639
Molecular Weight (calculated)
22581.8 Da
IEP (calculated)
8.259
GRAVY (calculated)
-0.126
Length
212 amino acids
Sequence
(BLAST)
001: MARVAVAGVL ALAATTIAIC AAVSSATVTV NEPIVNGAST TQGIVRWHVA DALRRDMGIA AGLIRIFFHD CFPQGCDASV LLSGSDSEQN LGPNETLRPE
101: ARKLIDDIRA AVHAACGPTV SCMRRHHHAS HQGRRRRVWN AAQVLDVRTP DALDNKYVLL GPDREAGAVQ VGPGPHERRQ HVNNRTATRY ALNQAAFFAS
201: AGHSDEGLAA DA
Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)
001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI
Arabidopsis Description
PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.