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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
extracellular: 19038476
extracellular: 19226311
nucleus: 19621931
extracellular: 23159799
extracellular: 24083427
plasma membrane: 27800704
plastid: 27992503
extracellular: 28232208
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 23159799 doi
SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID: 19621931 doi
T Aki, S Yanagisawa
Department of Applied Biological Chemistry, The University of Tokyo, Japan.
msms PMID: 19226311 doi
WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002898_P001 Maize extracellular 69.36 67.61
Zm00001d002897_P001 Maize plasma membrane 70.81 67.31
EES13148 Sorghum extracellular 68.21 65.19
TraesCS2D01G584600.1 Wheat extracellular 60.98 62.24
TraesCS2B01G614400.1 Wheat extracellular 60.69 61.95
HORVU2Hr1G124970.2 Barley extracellular 60.69 61.4
TraesCS2A01G573400.1 Wheat extracellular 59.83 61.06
HORVU2Hr1G124930.1 Barley extracellular 60.12 61.0
TraesCS2D01G584700.1 Wheat extracellular 60.12 61.0
TraesCS2A01G573900.1 Wheat extracellular 59.83 60.7
TraesCS2A01G573500.1 Wheat golgi 59.54 60.41
TraesCS2B01G614100.1 Wheat extracellular 59.25 60.12
TraesCS2B01G613900.1 Wheat extracellular, vacuole 59.25 60.12
TraesCS2A01G573600.1 Wheat cytosol 41.62 59.26
TraesCS2B01G614000.1 Wheat extracellular, vacuole 56.94 57.6
HORVU2Hr1G124960.3 Barley plasma membrane 60.4 57.26
TraesCS2A01G573700.1 Wheat extracellular 53.47 54.9
TraesCS2B01G613500.1 Wheat extracellular 54.34 54.18
TraesCS2D01G584800.1 Wheat extracellular 36.42 53.85
TraesCS2A01G574400.1 Wheat extracellular 53.18 53.18
TraesCS2B01G613400.1 Wheat extracellular 52.89 52.74
Os04t0689000-01 Rice extracellular 50.0 51.18
OQU82629 Sorghum extracellular 31.21 50.94
Os04t0688200-01 Rice extracellular 51.16 50.86
HORVU7Hr1G011840.2 Barley extracellular 48.84 49.56
Os04t0688600-01 Rice extracellular 46.82 48.36
Os04t0688500-01 Rice extracellular 48.55 47.73
TraesCS3B01G034300.1 Wheat extracellular 45.09 46.29
Os04t0688300-01 Rice extracellular 45.38 46.18
TraesCS3D01G031800.1 Wheat extracellular 44.8 45.99
GSMUA_Achr9P29540_001 Banana extracellular 39.6 41.9
Os01t0963000-01 Rice extracellular 39.31 38.2
Os01t0962700-01 Rice extracellular 41.33 37.93
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1EntrezGene:4337482EMBL:AK102307
EMBL:AK104833ProteinID:BAF16251.1ProteinID:BAS91755.1ProteinID:CAE01785.2ProteinID:EEE61954.1GO:GO:0003674
GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0005618
GO:GO:0005623GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009505GO:GO:0009506GO:GO:0009664GO:GO:0009987GO:GO:0016043GO:GO:0016491
GO:GO:0020037GO:GO:0030312GO:GO:0042744GO:GO:0046872GO:GO:0055114GO:GO:0098869
InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016EnsemblPlantsGene:Os04g0688100EnsemblPlants:Os04t0688100-01PFAM:PF00141
PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31235
PANTHER:PTHR31235:SF79InterPro:Peroxidase_plnInterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSUniProt:Q7XSV2SUPFAM:SSF48113
InterPro:Secretory_peroxidaseSignalP:SignalP-noTMUniParc:UPI000015C579RefSeq:XP_015635541.1SEG:seg:
Description
class III peroxidase 59Peroxidase (EC 1.11.1.7). (Os04t0688100-01);Peroxidase (EC 1.11.1.7). (Os04t0688100-02)
Coordinates
chr4:-:35187454..35189187
Molecular Weight (calculated)
36990.2 Da
IEP (calculated)
5.699
GRAVY (calculated)
0.043
Length
346 amino acids
Sequence
(BLAST)
001: MASKLGMVVL LISGLFAARC AAVVTTGEPV VAGLSWGFYD TSCPSVEGIV RWHVTEALRR DIGIAAGLVR IFFHDCFPQG CDASVLLTGS QSELGEIPNQ
101: TLRPSALKLI EDIRAAVHSA CGAKVSCADI TTLATRDAIV ASGGPYFDVP LGRRDGLAPA SSDKVGLLPA PFFDVPTLIQ AFKDRNLDKT DLVALSGAHT
201: IGLGHCGSFN DRFDGSKPIM DPVLVKKLQA KCAKDVPVNS VTQELDVRTP NAFDNKYYFD LIAKQGIFKS DQGLIEDAQT NRTAVRFALN QAAFFDQFAR
301: SMVKMSQMDV LTGNAGEIRN NCAAPNRRSS DLLNAADDDQ GFAADA
Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)
001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI
Arabidopsis Description
PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.