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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
 extracellular: 21347307
extracellular: 23159799
extracellular: 25047395
extracellular: 26072143
plasma membrane: 27800704
extracellular: 28232208
msms PMID: 26072143 doi
B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 25047395 doi
JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID: 21347307 doi
L Zhou, SA Bokhari, CJ Dong, JY Liu
Laboratory of Molecular Biology, School of Life Sciences, Tsinghua University, Beijing, People's Republic of China.
msms PMID: 23159799 doi
SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G518200.1 Wheat extracellular 63.76 63.41
TraesCS3D01G517800.1 Wheat extracellular 63.48 62.95
TraesCS3A01G509600.1 Wheat extracellular 63.2 62.85
HORVU3Hr1G112040.1 Barley extracellular 63.2 62.67
TraesCS3B01G578600.1 Wheat extracellular 62.08 61.9
Os01t0962700-01 Rice extracellular 63.76 60.21
Zm00001d042022_P001 Maize extracellular 60.39 59.56
EES02102 Sorghum extracellular 62.64 59.15
TraesCS3A01G510900.1 Wheat cytosol 64.33 56.82
GSMUA_Achr3P02950_001 Banana extracellular 50.84 55.02
VIT_18s0072g00160.t01 Wine grape cytosol, mitochondrion, plastid 50.56 54.22
GSMUA_Achr10P... Banana extracellular 42.98 53.31
KRH35105 Soybean extracellular 51.4 52.44
Solyc04g071890.2.1 Tomato extracellular 51.12 52.3
PGSC0003DMT400064555 Potato cytosol 38.76 52.27
PGSC0003DMT400064554 Potato extracellular 49.72 50.86
KRG91690 Soybean nucleus 50.56 50.56
CDX96335 Canola extracellular, golgi 49.44 48.62
Bra016127.1-P Field mustard extracellular, golgi 49.44 48.62
PGSC0003DMT400064553 Potato extracellular 48.6 48.19
Bra003918.1-P Field mustard extracellular, golgi 48.88 48.07
CDX68305 Canola extracellular, golgi 48.88 48.07
Solyc04g071900.2.1 Tomato extracellular 47.19 47.86
CDX72818 Canola extracellular, golgi, vacuole 48.6 47.79
CDY53824 Canola extracellular, golgi 48.31 47.51
AT1G71695.1 Thale cress extracellular, golgi, vacuole 46.63 46.37
GSMUA_AchrUn_... Banana extracellular 18.54 43.71
KRH70265 Soybean cytosol 19.94 40.34
KRH35106 Soybean extracellular 39.61 40.06
Os04t0688100-01 Rice extracellular 38.2 39.31
KRH08650 Soybean endoplasmic reticulum 37.64 38.84
KRH08653 Soybean endoplasmic reticulum 35.67 36.81
Os04t0688600-01 Rice extracellular 34.27 36.42
KRH08651 Soybean extracellular 35.39 36.42
Os04t0688200-01 Rice extracellular 35.39 36.21
Os04t0689000-01 Rice extracellular 33.99 35.8
Os04t0688500-01 Rice extracellular 34.27 34.66
Os04t0688300-01 Rice extracellular 32.02 33.53
GSMUA_Achr2P20510_001 Banana unclear 55.34 29.01
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1EntrezGene:4324556EMBL:AK061131
EMBL:AK102172ProteinID:BAB63627.1ProteinID:BAF07397.1ProteinID:BAS76353.1ProteinID:CAH69264.1ProteinID:EAZ14929.1
GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0005618GO:GO:0005623GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009505GO:GO:0009506GO:GO:0009664GO:GO:0009987GO:GO:0016043
GO:GO:0016491GO:GO:0020037GO:GO:0030312GO:GO:0042744GO:GO:0046872GO:GO:0055114
GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016EnsemblPlantsGene:Os01g0963000EnsemblPlants:Os01t0963000-01
PFAM:PF00141PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873
PANTHER:PTHR31235PANTHER:PTHR31235:SF12InterPro:Peroxidase_plnInterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSUniProt:Q94DM2
SUPFAM:SSF48113InterPro:Secretory_peroxidaseSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000A6C0ERefSeq:XP_015620924.1
SEG:seg:::::
Description
class III peroxidase 22Similar to Peroxidase BP 1 precursor. (Os01t0963000-01);Similar to Peroxidase BP 1 precursor. (Os01t0963000-04)
Coordinates
chr1:+:42441660..42442936
Molecular Weight (calculated)
38049.2 Da
IEP (calculated)
4.820
GRAVY (calculated)
0.096
Length
356 amino acids
Sequence
(BLAST)
001: MASRTSATAG MLLLAAAAAL VCSSAAARMP PLAKGLSLGY YDASCPQAEA VVFEFLQDAI AKDVGLAAAL IRLHFHDCFV QGCDASILLD STPTEKSEKL
101: APPNKTLRKS AFDAIDDLRD LLDRECGDTV VSCSDIVTLA ARDSVLLAGG PWYDVPLGRH DGSSFASEDA VLSALPSPDS NVTTLLEALG KLKLDAHDLV
201: ALSGAHTVGI AHCTSFDKRL FPQVDPTMDK WFAGHLKVTC PVLNTNDTTV NDIRTPNTFD NKYYVDLQNR QGLFTSDQGL FFNATTKPIV TKFAVDQSAF
301: FDQYVYSVVK MGMIEVLTGS QGQIRKRCSV SNAAAAGDRA WSVVETVAEA AESLVL
Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)
001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI
Arabidopsis Description
PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.