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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
 endoplasmic reticulum: 21107622
extracellular: 22945350
endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 22945350 doi
C Liao, F Hochholdinger, C Li
Key Laboratory of Plant-Soil Interactions, Ministry of Education, Center for Resources, Environment and Food Security, China Agricultural University, Beijing, China.
msms PMID: 21107622 doi
N Ahsan, T Nakamura, S Komatsu
National Institute of Crop Science, 2-1-18 Kannondai, Tsukuba, 305-8518, Japan.
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH35106 Soybean extracellular 55.94 54.83
KRH70265 Soybean cytosol 25.51 50.0
KRH08650 Soybean endoplasmic reticulum 49.86 49.86
KRH08651 Soybean extracellular 46.09 45.95
PGSC0003DMT400064555 Potato cytosol 31.59 41.29
KRH35105 Soybean extracellular 41.16 40.69
VIT_18s0072g00160.t01 Wine grape cytosol, mitochondrion, plastid 38.84 40.36
AT1G71695.1 Thale cress extracellular, golgi, vacuole 41.45 39.94
PGSC0003DMT400064554 Potato extracellular 40.29 39.94
KRG91690 Soybean nucleus 41.16 39.89
Bra016127.1-P Field mustard extracellular, golgi 41.74 39.78
CDX96335 Canola extracellular, golgi 41.74 39.78
CDX72818 Canola extracellular, golgi, vacuole 41.45 39.5
Solyc04g071890.2.1 Tomato extracellular 39.71 39.37
Bra003918.1-P Field mustard extracellular, golgi 41.16 39.23
CDX68305 Canola extracellular, golgi 41.16 39.23
GSMUA_AchrUn_... Banana extracellular 17.1 39.07
CDY53824 Canola extracellular, golgi 40.58 38.67
Solyc04g071900.2.1 Tomato extracellular 38.55 37.89
PGSC0003DMT400064553 Potato extracellular 39.13 37.6
TraesCS3B01G578600.1 Wheat extracellular 37.68 36.41
TraesCS3A01G509600.1 Wheat extracellular 37.68 36.31
GSMUA_Achr10P... Banana extracellular 30.14 36.24
HORVU3Hr1G112040.1 Barley extracellular 37.68 36.21
TraesCS3D01G517800.1 Wheat extracellular 37.39 35.93
Os01t0963000-01 Rice extracellular 36.81 35.67
GSMUA_Achr3P02950_001 Banana extracellular 33.91 35.56
TraesCS3D01G518200.1 Wheat extracellular 36.52 35.2
Zm00001d042022_P001 Maize extracellular 36.52 34.9
HORVU7Hr1G013470.1 Barley extracellular 35.65 34.26
EES02106 Sorghum extracellular, plastid 35.65 33.98
TraesCS3D01G517000.1 Wheat extracellular 35.65 33.98
Os01t0962700-01 Rice extracellular 37.1 33.95
TraesCS7D01G066400.1 Wheat golgi 34.78 33.52
TraesCSU01G103400.1 Wheat golgi 34.2 33.24
TraesCSU01G103300.1 Wheat extracellular 34.2 33.24
HORVU3Hr1G112350.1 Barley extracellular 36.52 33.16
TraesCS7A01G070900.1 Wheat extracellular 34.49 32.87
TraesCS3B01G578000.1 Wheat extracellular 35.07 32.79
TraesCS4A01G419300.1 Wheat golgi 34.2 32.78
TraesCS3A01G510600.1 Wheat extracellular, vacuole 34.78 32.7
Zm00001d042019_P002 Maize extracellular 33.62 32.68
EES02102 Sorghum extracellular 35.36 32.36
TraesCS3D01G516900.1 Wheat extracellular 34.2 32.33
TraesCS3A01G510900.1 Wheat cytosol 37.39 32.01
TraesCS3B01G577900.1 Wheat extracellular 34.49 31.15
HORVU3Hr1G112000.1 Barley extracellular 32.75 30.62
TraesCS3A01G509100.1 Wheat extracellular 32.75 29.35
TraesCS3A01G510300.1 Wheat extracellular 29.57 27.06
HORVU3Hr1G111970.1 Barley cytosol, extracellular, plastid 14.2 21.97
GSMUA_Achr2P20510_001 Banana unclear 37.68 19.15
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10EntrezGene:100795412MapMan:35.1EMBL:ACUP02010187
EMBL:BT095181UniProt:C6TCA1EnsemblPlantsGene:GLYMA_16G164400GO:GO:0003674GO:GO:0003824GO:GO:0004601
GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0006950
GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009505GO:GO:0009506
GO:GO:0009664GO:GO:0009987GO:GO:0016043GO:GO:0016491GO:GO:0020037GO:GO:0030312
GO:GO:0042744GO:GO:0046872GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016EnsemblPlants:KRH08653ProteinID:KRH08653ProteinID:KRH08653.1PFAM:PF00141PRINTS:PR00458
PRINTS:PR00461ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31235PANTHER:PTHR31235:SF12
MetaCyc:PWY-5461MetaCyc:PWY-5466MetaCyc:PWY-5469MetaCyc:PWY-6824MetaCyc:PWY-7214MetaCyc:PWY-7445
InterPro:Peroxidase_plnInterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSSUPFAM:SSF48113InterPro:Secretory_peroxidaseSignalP:SignalP-noTM
UniParc:UPI0001B16011SEG:seg::::
Description
hypothetical protein
Coordinates
chr16:-:32320706..32323287
Molecular Weight (calculated)
38133.6 Da
IEP (calculated)
6.398
GRAVY (calculated)
-0.126
Length
345 amino acids
Sequence
(BLAST)
001: MARVSPLFHS LLLISSLVLA SQIHVSSGKL VPGLSWNYYL LTCPKLERII RKHLEDVFEK DSGVAPGILR LFFHDCFPNG CDASILLNGD GDEKQHRANF
101: GLRQEAIDAI ENLRVLIYKQ CLPVVSCSDI LVIAAREAVR QLGGPDFDVP LGRKDGLGPN ATAPDNLPAP FFRTDDLLRG FGNRGFDATD VVALSGAHTY
201: GRAHCPSLVN RTIETDPPID PNFNNNLIAT CPNAESPNTV NLDVRTPVKF DNMYYINLLN RQGVFTSDQD IAGSPKTKEI VNQFASDQKL FFKKFSDAFV
301: KVSQLDVITD RIGKGEIRDK CFVANKRRSS MASVVEEVVE LAQEI
Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)
001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI
Arabidopsis Description
PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.