Factsheet for Solyc04g071900.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 20496099
extracellular: 22364583
extracellular: 22892874
nucleus: 28394025
extracellular: 28847647
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 20496099 doi

D Dahal, A Pich, HP Braun, K Wydra

Institute for Plant Diseases and Plant Protection, Faculty of Natural Sciences, Leibniz Universität Hannover, Herrenhäuser Str.2, 30419 Hannover, Germany. dahal@ipp.uni-hannover.de

msms PMID: 22892874 doi

EH Konozy, H Rogniaux, M Causse, M Faurobert

Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com

msms PMID: 28847647 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA. Electronic address: jabadia@eead.csic.es.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064553	Potato	extracellular	89.17	87.19
Solyc04g071890.2.1	Tomato	extracellular	65.24	65.8
VIT_18s0072g00160.t01	Wine grape	cytosol, mitochondrion, plastid	60.4	63.86
Bra016127.1-P	Field mustard	extracellular, golgi	61.82	59.94
CDX96335	Canola	extracellular, golgi	61.82	59.94
AT1G71695.1	Thale cress	extracellular, golgi, vacuole	60.97	59.78
CDX72818	Canola	extracellular, golgi, vacuole	61.54	59.67
Bra003918.1-P	Field mustard	extracellular, golgi	60.97	59.12
CDX68305	Canola	extracellular, golgi	60.97	59.12
CDY53824	Canola	extracellular, golgi	60.68	58.84
GSMUA_Achr3P02950_001	Banana	extracellular	52.42	55.93
GSMUA_AchrUn_...	Banana	extracellular	23.65	54.97
GSMUA_Achr10P...	Banana	extracellular	44.73	54.7
HORVU7Hr1G013470.1	Barley	extracellular	52.71	51.53
TraesCS7D01G066400.1	Wheat	golgi	52.14	51.12
TraesCS3D01G517000.1	Wheat	extracellular	52.14	50.55
TraesCSU01G103400.1	Wheat	golgi	51.0	50.42
TraesCS7A01G070900.1	Wheat	extracellular	51.85	50.28
TraesCSU01G103300.1	Wheat	extracellular	50.71	50.14
Zm00001d042022_P001	Maize	extracellular	51.57	50.14
EES02106	Sorghum	extracellular, plastid	51.57	50.0
TraesCS3B01G578600.1	Wheat	extracellular	50.71	49.86
TraesCS4A01G419300.1	Wheat	golgi	51.0	49.72
HORVU3Hr1G112040.1	Barley	extracellular	50.71	49.58
TraesCS3D01G517800.1	Wheat	extracellular	50.71	49.58
TraesCS3A01G509600.1	Wheat	extracellular	50.43	49.44
EES02102	Sorghum	extracellular	52.42	48.81
TraesCS3B01G578000.1	Wheat	extracellular	51.0	48.51
TraesCS3A01G510600.1	Wheat	extracellular, vacuole	50.71	48.5
TraesCS3D01G518200.1	Wheat	extracellular	49.29	48.32
KRH70265	Soybean	cytosol	24.22	48.3
KRH08650	Soybean	endoplasmic reticulum	47.01	47.83
Os01t0963000-01	Rice	extracellular	47.86	47.19
KRH35106	Soybean	extracellular	47.29	47.16
KRH08651	Soybean	extracellular	46.15	46.82
Os01t0962700-01	Rice	extracellular	49.86	46.42
HORVU3Hr1G112350.1	Barley	extracellular	49.57	45.79
Zm00001d042019_P002	Maize	extracellular	45.58	45.07
TraesCS3D01G516900.1	Wheat	extracellular	46.72	44.93
TraesCS3B01G577900.1	Wheat	extracellular	48.72	44.76
TraesCS3A01G510900.1	Wheat	cytosol	49.86	43.42
HORVU3Hr1G112000.1	Barley	extracellular	44.73	42.55
TraesCS3A01G509100.1	Wheat	extracellular	44.16	40.26
TraesCS3A01G510300.1	Wheat	extracellular	41.88	38.99
KRH08653	Soybean	endoplasmic reticulum	37.89	38.55
GSMUA_Achr2P20510_001	Banana	unclear	54.42	28.13
HORVU3Hr1G111970.1	Barley	cytosol, extracellular, plastid	16.24	25.56

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037
GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:K4BTH7	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF157	InterPro:Peroxidase_pln
InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc04g071900.2
EnsemblPlants:Solyc04g071900.2.1	TMHMM:TMhelix	UniParc:UPI0002766C01	SEG:seg	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4BTH7]

Coordinates

chr4:+:58919910..58922921

Molecular Weight (calculated)

38895.1 Da

IEP (calculated)

7.736

GRAVY (calculated)

-0.181

Length

351 amino acids

Sequence
(BLAST)

001: MASPSLFTFD SSLLVVLILS IFVSIHFQVT QAQGTQPIVK GLSWTFYDSI CPNAESIIRR RLQNVFRQDI GQAAGLLRLH FHDCFVQGCD GSVLLDGSAS
101: GPSEKDAPPN LTLRQQAFRI IEDLRRRVHR DCGRVVSCAD ITAIAARDSV FFSGGPDYDL PLGRRDGLTF ATTNETLANL PPPSFNTSLI LASLATKNFT
201: PTDVVALSGG HTIGISHCSS FTDRLYPNQD SSMDKTFANN LKTTCPTRNS TNTTVLDIRS PNKFDNKYYV DLMNRQGLFT SDQDLYTDRR TRGIVTSFAI
301: NESLFFKEFV NSMIKMGQLN VLTGTQGEIR ANCSVRNSNN YNLIQGTWSE I

Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)

001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI

Arabidopsis Description

PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.