CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi, vacuole

Predictor Summary:

extracellular 6
golgi 6
plasma membrane 5
endoplasmic reticulum 5
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96335	Canola	extracellular, golgi	98.89	98.89
CDX68305	Canola	extracellular, golgi	92.27	92.27
CDY53824	Canola	extracellular, golgi	91.99	91.99
AT1G71695.1	Thale cress	extracellular, golgi, vacuole	84.25	85.2
VIT_18s0072g00160.t01	Wine grape	cytosol, mitochondrion, plastid	57.46	62.65
PGSC0003DMT400064555	Potato	cytosol	45.3	62.12
Solyc04g071900.2.1	Tomato	extracellular	59.67	61.54
KRH35105	Soybean	extracellular	59.12	61.32
KRG91690	Soybean	nucleus	59.67	60.67
PGSC0003DMT400064553	Potato	extracellular	59.94	60.45
Solyc04g071890.2.1	Tomato	extracellular	57.46	59.77
PGSC0003DMT400064554	Potato	extracellular	57.46	59.77
GSMUA_Achr3P02950_001	Banana	extracellular	50.83	55.93
GSMUA_Achr10P...	Banana	extracellular	43.92	55.4
TraesCS3A01G509600.1	Wheat	extracellular	54.42	55.03
TraesCS3D01G517800.1	Wheat	extracellular	54.42	54.87
TraesCS3D01G518200.1	Wheat	extracellular	53.87	54.47
Zm00001d042022_P001	Maize	extracellular	53.87	54.02
TraesCS3B01G578600.1	Wheat	extracellular	53.04	53.78
EES02106	Sorghum	extracellular, plastid	53.04	53.04
HORVU3Hr1G112040.1	Barley	extracellular	52.49	52.92
EES02102	Sorghum	extracellular	53.87	51.72
TraesCS3D01G517000.1	Wheat	extracellular	51.66	51.66
HORVU7Hr1G013470.1	Barley	extracellular	50.55	50.97
TraesCSU01G103400.1	Wheat	golgi	49.72	50.7
TraesCS3A01G510600.1	Wheat	extracellular, vacuole	51.38	50.68
TraesCS3B01G578000.1	Wheat	extracellular	51.66	50.68
TraesCS7D01G066400.1	Wheat	golgi	50.0	50.56
TraesCS7A01G070900.1	Wheat	extracellular	50.55	50.55
TraesCSU01G103300.1	Wheat	extracellular	49.45	50.42
Os01t0962700-01	Rice	extracellular	52.49	50.4
GSMUA_AchrUn_...	Banana	extracellular	20.99	50.33
TraesCS4A01G419300.1	Wheat	golgi	50.0	50.28
HORVU3Hr1G112350.1	Barley	extracellular	51.38	48.95
Zm00001d042019_P002	Maize	extracellular	47.79	48.73
Os01t0963000-01	Rice	extracellular	47.79	48.6
TraesCS3D01G516900.1	Wheat	extracellular	48.34	47.95
TraesCS3A01G510900.1	Wheat	cytosol	52.49	47.15
TraesCS3B01G577900.1	Wheat	extracellular	49.72	47.12
KRH70265	Soybean	cytosol	22.65	46.59
KRH08650	Soybean	endoplasmic reticulum	43.37	45.51
TraesCS3A01G509100.1	Wheat	extracellular	48.07	45.19
KRH35106	Soybean	extracellular	43.92	45.17
KRH08651	Soybean	extracellular	41.99	43.93
HORVU3Hr1G112000.1	Barley	extracellular	44.75	43.9
KRH08653	Soybean	endoplasmic reticulum	39.5	41.45
TraesCS3A01G510300.1	Wheat	extracellular	40.06	38.46
GSMUA_Achr2P20510_001	Banana	unclear	52.49	27.98
HORVU3Hr1G111970.1	Barley	cytosol, extracellular, plastid	16.85	27.35

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:A0A078CCU2	EnsemblPlants:CDX72818
ProteinID:CDX72818	ProteinID:CDX72818.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00103208001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF157	MetaCyc:PWY-5461	MetaCyc:PWY-7214	MetaCyc:PWY-7445
InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI0004EE77C3	:	:	:	:

Description

BnaC06g32660D

Coordinates

chrLK031797:+:435912..438112

Molecular Weight (calculated)

39763.1 Da

IEP (calculated)

8.739

GRAVY (calculated)

-0.045

Length

362 amino acids

Sequence
(BLAST)

001: MGKDLSKRVL TFLILISLLA VAMNLLSTVE AQNKKKPRRD VPLVKGLSWS FYQKACPKVE SIIRKELKKV FKRDIGLAAA ILRIHFHDCF VQGCEASVLL
101: DGSASGPGEQ SSIPNLTLRQ AAFVVINNLR ALVHKQCGQV VSCSDILALA ARDSVVLSGG PDYAVPLGRR DSLAFASQNT TLNNLPPPFA KASQLIADFA
201: NRNLNITDLV ALSGGHTIGI AHCPSFTDRL YPNQDPTMNK SFANNLKRTC PTANSSNTQV NDIRSPDVFD NKYYVDLMNR QGLFTSDQDL FTDKRTRGIV
301: ESFAIDQKLF FDHFVVGMIK MGQMSVLTGS QGEIRANCSA RNTESFMSIL EEGILEEALS MI

Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)

001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI

Arabidopsis Description

PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.