Factsheet for TraesCS4A01G419300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G103400.1	Wheat	golgi	93.61	94.93
TraesCSU01G103300.1	Wheat	extracellular	93.33	94.65
TraesCS7A01G070900.1	Wheat	extracellular	93.61	93.09
HORVU7Hr1G013470.1	Barley	extracellular	86.11	86.35
TraesCS3A01G510600.1	Wheat	extracellular, vacuole	77.78	76.29
EES02106	Sorghum	extracellular, plastid	67.22	66.85
TraesCS3A01G509100.1	Wheat	extracellular	68.61	64.16
Zm00001d042019_P002	Maize	extracellular	59.72	60.56
TraesCS3A01G510300.1	Wheat	extracellular	58.89	56.23
VIT_18s0072g00160.t01	Wine grape	cytosol, mitochondrion, plastid	50.28	54.52
GSMUA_Achr10P...	Banana	extracellular	43.33	54.36
KRH35105	Soybean	extracellular	51.11	52.72
TraesCS3A01G509600.1	Wheat	extracellular	51.94	52.23
GSMUA_Achr3P02950_001	Banana	extracellular	47.5	51.98
KRG91690	Soybean	nucleus	51.39	51.97
Solyc04g071900.2.1	Tomato	extracellular	49.72	51.0
CDX96335	Canola	extracellular, golgi	50.83	50.55
Bra016127.1-P	Field mustard	extracellular, golgi	50.83	50.55
GSMUA_AchrUn_...	Banana	extracellular	21.11	50.33
AT1G71695.1	Thale cress	extracellular, golgi, vacuole	50.0	50.28
CDX72818	Canola	extracellular, golgi, vacuole	50.28	50.0
PGSC0003DMT400064555	Potato	cytosol	36.67	50.0
Solyc04g071890.2.1	Tomato	extracellular	47.78	49.43
PGSC0003DMT400064554	Potato	extracellular	47.5	49.14
Bra003918.1-P	Field mustard	extracellular, golgi	49.17	48.9
CDX68305	Canola	extracellular, golgi	49.17	48.9
PGSC0003DMT400064553	Potato	extracellular	48.33	48.47
CDY53824	Canola	extracellular, golgi	48.61	48.34
TraesCS3A01G510900.1	Wheat	cytosol	53.06	47.39
TraesCS2A01G573400.1	Wheat	extracellular	38.33	40.71
TraesCS2A01G574400.1	Wheat	extracellular	38.61	40.17
TraesCS2A01G573500.1	Wheat	golgi	37.78	39.88
TraesCS2A01G573700.1	Wheat	extracellular	37.22	39.76
TraesCS2A01G573900.1	Wheat	extracellular	36.94	39.0
TraesCS2A01G571700.1	Wheat	nucleus	35.83	37.83
KRH35106	Soybean	extracellular	36.94	37.78
TraesCS2A01G571500.1	Wheat	extracellular	35.28	37.24
TraesCS2A01G573300.1	Wheat	extracellular	36.39	37.22
KRH08650	Soybean	endoplasmic reticulum	35.56	37.1
TraesCS2A01G573600.1	Wheat	cytosol	24.17	35.8
TraesCS2A01G572700.1	Wheat	vacuole	33.89	35.78
KRH08651	Soybean	extracellular	33.89	35.26
TraesCS2A01G572600.1	Wheat	extracellular, vacuole	32.78	34.81
TraesCS1A01G124200.1	Wheat	extracellular	33.33	34.48
TraesCS2A01G572800.1	Wheat	extracellular	32.5	34.41
TraesCS2A01G571300.1	Wheat	plastid	35.28	34.32
KRH08653	Soybean	endoplasmic reticulum	32.78	34.2
TraesCS3A01G425000.1	Wheat	cytosol, mitochondrion, plastid	22.5	33.89
TraesCS2A01G571600.1	Wheat	extracellular	30.56	33.64
KRH70265	Soybean	cytosol	16.11	32.95
TraesCS2A01G572500.1	Wheat	extracellular	29.17	30.43
GSMUA_Achr2P20510_001	Banana	unclear	51.67	27.39

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF66	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G419300
EnsemblPlants:TraesCS4A01G419300.1	TIGR:cd00693	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:689136697..689137779

Molecular Weight (calculated)

39029.5 Da

IEP (calculated)

8.006

GRAVY (calculated)

-0.134

Length

360 amino acids

Sequence
(BLAST)

001: MARAPPLAAV VVAVAVVVAS SLGHGASSAE PPVARGLSFD FYRRTCPRAE SIVRGFVQDA VRKDIGLAAG LLRLHFHDCF VQGCDASVLL DGSATGPGEQ
101: QAPPNLTLRP SAFKAVNDIR DRLERECHRA VVSCADILAL AARDSVVVSG GPDYRVPLGR RDSRRFASRQ DVLSDLPAPS SNVPSLLALL RPLGLDATDL
201: VTISGGHTIG QAHCSSFEDR LFPRPDPTIN PPFLARLKGT CLAKGTDRRT VLDVRTPNVF DNQYYVDLVN REGLFVSDQD LFTNDITRPI VERFARSQRD
301: FFEQFGVSMG KMGQMRVRTS DLGEVRRNCS ARNPGPAAAD ELQWPSLVQT IVDAAAERLG

Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)

001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI

Arabidopsis Description

PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.