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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
 nucleus: 21132161
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH35105 Soybean extracellular 94.1 95.99
Bra016127.1-P Field mustard extracellular, golgi 61.24 60.22
CDX96335 Canola extracellular, golgi 61.24 60.22
CDX72818 Canola extracellular, golgi, vacuole 60.67 59.67
AT1G71695.1 Thale cress extracellular, golgi, vacuole 59.27 58.94
Bra003918.1-P Field mustard extracellular, golgi 59.83 58.84
CDX68305 Canola extracellular, golgi 59.83 58.84
CDY53824 Canola extracellular, golgi 58.99 58.01
GSMUA_Achr10P... Banana extracellular 46.07 57.14
GSMUA_Achr3P02950_001 Banana extracellular 52.81 57.14
HORVU7Hr1G013470.1 Barley extracellular 53.93 53.48
TraesCS3D01G517000.1 Wheat extracellular 54.21 53.31
Zm00001d042022_P001 Maize extracellular 53.93 53.19
TraesCS7D01G066400.1 Wheat golgi 53.37 53.07
GSMUA_AchrUn_... Banana extracellular 22.47 52.98
TraesCS3B01G578000.1 Wheat extracellular 54.78 52.85
TraesCS3A01G509600.1 Wheat extracellular 53.09 52.79
HORVU3Hr1G112040.1 Barley extracellular 53.09 52.65
EES02102 Sorghum extracellular 55.62 52.52
TraesCS3D01G517800.1 Wheat extracellular 52.81 52.37
TraesCS3D01G518200.1 Wheat extracellular 52.53 52.23
TraesCSU01G103400.1 Wheat golgi 51.97 52.11
TraesCS3B01G578600.1 Wheat extracellular 52.25 52.1
TraesCS3A01G510600.1 Wheat extracellular, vacuole 53.65 52.04
EES02106 Sorghum extracellular, plastid 52.81 51.93
TraesCSU01G103300.1 Wheat extracellular 51.69 51.83
TraesCS4A01G419300.1 Wheat golgi 51.97 51.39
TraesCS7A01G070900.1 Wheat extracellular 52.25 51.38
KRH08650 Soybean endoplasmic reticulum 49.44 51.01
KRH70265 Soybean cytosol 25.0 50.57
Os01t0963000-01 Rice extracellular 50.56 50.56
Os01t0962700-01 Rice extracellular 52.81 49.87
KRH35106 Soybean extracellular 48.31 48.86
HORVU3Hr1G112350.1 Barley extracellular 51.97 48.68
Zm00001d042019_P002 Maize extracellular 48.31 48.45
TraesCS3B01G577900.1 Wheat extracellular 51.97 48.43
TraesCS3D01G516900.1 Wheat extracellular 49.16 47.95
TraesCS3A01G510900.1 Wheat cytosol 52.25 46.15
KRH08651 Soybean extracellular 44.66 45.95
HORVU3Hr1G112000.1 Barley extracellular 46.91 45.26
TraesCS3A01G509100.1 Wheat extracellular 46.63 43.12
TraesCS3A01G510300.1 Wheat extracellular 44.1 41.64
KRH08653 Soybean endoplasmic reticulum 39.89 41.16
GSMUA_Achr2P20510_001 Banana unclear 56.74 29.75
HORVU3Hr1G111970.1 Barley cytosol, extracellular, plastid 15.45 24.66
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10EntrezGene:100775837MapMan:35.1EMBL:ACUP02012699
EnsemblPlantsGene:GLYMA_20G169200GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575
GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0006950GO:GO:0006979GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009505GO:GO:0009506GO:GO:0009664GO:GO:0009987
GO:GO:0016043GO:GO:0016491GO:GO:0020037GO:GO:0030312GO:GO:0042744GO:GO:0046872
GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacUniProt:I1NH45InterPro:IPR002016
EnsemblPlants:KRG91690ProteinID:KRG91690ProteinID:KRG91690.1PFAM:PF00141PRINTS:PR00458PRINTS:PR00461
ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31235PANTHER:PTHR31235:SF157MetaCyc:PWY-5461
MetaCyc:PWY-5466MetaCyc:PWY-5469MetaCyc:PWY-6824MetaCyc:PWY-7214MetaCyc:PWY-7445InterPro:Peroxidase_pln
InterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSSUPFAM:SSF48113InterPro:Secretory_peroxidaseSignalP:SignalP-noTMUniParc:UPI000233D950
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr20:+:40692864..40695275
Molecular Weight (calculated)
38917.6 Da
IEP (calculated)
7.263
GRAVY (calculated)
-0.090
Length
356 amino acids
Sequence
(BLAST)
001: MASISCMSAI LSFLLISIFL SVYNIEVCEA QARPPTAKGL SYTFYDKSCP KLKSIVRSEL KKVFNKDIAQ AAGLLRLHFH DCFVQGCDGS VLLDGSASGP
101: GEKEAPPNLT LRPEAFKIIE NLRGLLEKSC GRVVSCSDIT ALTARDAVFL SGGPDYEIPL GRRDGLTFAT RQVTLDNLPP PSSNASTILS SLATKNLDPT
201: DVVALSGGHT IGISHCSSFT NRLYPTQDPV MDKTFGNNLR RTCPAANTDN TTVLDIRSPN TFDNKYYVDL LNRQGLFTSD QDLYTDKRTK GIVSDFAVNQ
301: NLFFEKFVFA MLKMGQLNVL TGKQGEIRAN CSVRNANNKS LLTSVVEDVV ETLIEM
Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)
001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI
Arabidopsis Description
PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.