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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 4
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plastid
 nucleus: 21132161
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH70265 Soybean cytosol 42.61 83.52
KRH08651 Soybean extracellular 64.93 64.74
KRH35106 Soybean extracellular 61.16 59.94
KRH35105 Soybean extracellular 50.43 49.86
KRH08653 Soybean endoplasmic reticulum 49.86 49.86
KRG91690 Soybean nucleus 51.01 49.44
PGSC0003DMT400064555 Potato cytosol 36.81 48.11
PGSC0003DMT400064554 Potato extracellular 47.83 47.41
Solyc04g071900.2.1 Tomato extracellular 47.83 47.01
Solyc04g071890.2.1 Tomato extracellular 47.25 46.84
PGSC0003DMT400064553 Potato extracellular 46.96 45.13
VIT_18s0072g00160.t01 Wine grape cytosol, mitochondrion, plastid 42.61 44.28
Bra003918.1-P Field mustard extracellular, golgi 45.8 43.65
CDX96335 Canola extracellular, golgi 45.8 43.65
CDX68305 Canola extracellular, golgi 45.8 43.65
Bra016127.1-P Field mustard extracellular, golgi 45.8 43.65
CDX72818 Canola extracellular, golgi, vacuole 45.51 43.37
GSMUA_Achr10P... Banana extracellular 35.65 42.86
CDY53824 Canola extracellular, golgi 44.93 42.82
TraesCS3B01G578600.1 Wheat extracellular 44.06 42.58
AT1G71695.1 Thale cress extracellular, golgi, vacuole 44.06 42.46
GSMUA_Achr3P02950_001 Banana extracellular 40.29 42.25
HORVU3Hr1G112040.1 Barley extracellular 43.77 42.06
TraesCS3A01G509600.1 Wheat extracellular 43.48 41.9
TraesCS3D01G517800.1 Wheat extracellular 43.48 41.78
GSMUA_AchrUn_... Banana extracellular 18.26 41.72
TraesCS3D01G518200.1 Wheat extracellular 42.32 40.78
Zm00001d042022_P001 Maize extracellular 42.03 40.17
EES02102 Sorghum extracellular 42.32 38.73
EES02106 Sorghum extracellular, plastid 39.71 37.85
Os01t0962700-01 Rice extracellular 41.16 37.67
Os01t0963000-01 Rice extracellular 38.84 37.64
TraesCS3A01G510900.1 Wheat cytosol 43.77 37.47
HORVU7Hr1G013470.1 Barley extracellular 38.55 37.05
TraesCSU01G103400.1 Wheat golgi 37.68 36.62
TraesCSU01G103300.1 Wheat extracellular 37.68 36.62
TraesCS7D01G066400.1 Wheat golgi 37.68 36.31
TraesCS7A01G070900.1 Wheat extracellular 37.68 35.91
TraesCS3B01G578000.1 Wheat extracellular 38.26 35.77
TraesCS3D01G517000.1 Wheat extracellular 37.39 35.64
TraesCS4A01G419300.1 Wheat golgi 37.1 35.56
Zm00001d042019_P002 Maize extracellular 36.23 35.21
TraesCS3B01G577900.1 Wheat extracellular 37.97 34.29
TraesCS3A01G510600.1 Wheat extracellular, vacuole 36.23 34.06
HORVU3Hr1G112350.1 Barley extracellular 37.39 33.95
TraesCS3D01G516900.1 Wheat extracellular 34.78 32.88
HORVU3Hr1G112000.1 Barley extracellular 35.07 32.79
TraesCS3A01G510300.1 Wheat extracellular 34.2 31.3
TraesCS3A01G509100.1 Wheat extracellular 34.2 30.65
HORVU3Hr1G111970.1 Barley cytosol, extracellular, plastid 15.07 23.32
GSMUA_Achr2P20510_001 Banana unclear 43.19 21.94
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1EMBL:ACUP02010187EnsemblPlantsGene:GLYMA_16G164200
GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0005618GO:GO:0005623GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009505GO:GO:0009506GO:GO:0009664GO:GO:0009987GO:GO:0016043
GO:GO:0016491GO:GO:0020037GO:GO:0030312GO:GO:0042744GO:GO:0046872GO:GO:0055114
GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacUniProt:I1MP38InterPro:IPR002016EnsemblPlants:KRH08650
ProteinID:KRH08650ProteinID:KRH08650.1PFAM:PF00141PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435
ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31235PANTHER:PTHR31235:SF12MetaCyc:PWY-5461MetaCyc:PWY-5466
MetaCyc:PWY-5469MetaCyc:PWY-6824MetaCyc:PWY-7214MetaCyc:PWY-7445InterPro:Peroxidase_plnInterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BSSUPFAM:SSF48113InterPro:Secretory_peroxidaseSignalP:SignalP-noTMUniParc:UPI000233C02ASEG:seg
Description
hypothetical protein
Coordinates
chr16:-:32307939..32310954
Molecular Weight (calculated)
37776.1 Da
IEP (calculated)
7.405
GRAVY (calculated)
-0.099
Length
345 amino acids
Sequence
(BLAST)
001: MARSSAYPLF LISSILFISH IYASQVEAKP PVVKGLSYSF YSKTCPKLES IVRKHLKKVF KDDNGQAPAL LRIFFHDCFV QGCDGSLLLD GSPSERDQPA
101: NGGIRTEALQ TIDDIRAIIH KECGRIVSCA DITVLAARDS VFLTGGPDYA VPLGRRDGLS FSTSGTSDLP KPFNTTGVTL DAFAAKNFDV TDVVALSGAH
201: TFGRAHCGTF FNRLSPLDPN MDKTLAKQLQ STCPDANSGN TVNLDIRTPT VFDNKYYLDL MNRQGVFTSD QDLLNDKRTK GLVNAFALNQ TLFFEKFVDA
301: TIKLSQLDVL TGNQGEIRGK CNVVNARKSL LTSVVEEVVQ LVDQF
Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)
001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI
Arabidopsis Description
PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.