Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 2
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
26583031
nucleus: 28394025 endoplasmic reticulum: 29145071 extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
26583031
doi
Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID:
29145071
doi
Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400064554 | Potato | extracellular | 97.13 | 97.13 |
Solyc04g071900.2.1 | Tomato | extracellular | 65.8 | 65.24 |
VIT_18s0072g00160.t01 | Wine grape | cytosol, mitochondrion, plastid | 60.34 | 63.25 |
Bra016127.1-P | Field mustard | extracellular, golgi | 60.34 | 58.01 |
CDX96335 | Canola | extracellular, golgi | 60.34 | 58.01 |
CDX72818 | Canola | extracellular, golgi, vacuole | 59.77 | 57.46 |
AT1G71695.1 | Thale cress | extracellular, golgi, vacuole | 58.05 | 56.42 |
Bra003918.1-P | Field mustard | extracellular, golgi | 58.62 | 56.35 |
CDX68305 | Canola | extracellular, golgi | 58.62 | 56.35 |
CDY53824 | Canola | extracellular, golgi | 58.05 | 55.8 |
GSMUA_Achr3P02950_001 | Banana | extracellular | 51.44 | 54.41 |
GSMUA_Achr10P... | Banana | extracellular | 44.54 | 54.01 |
GSMUA_AchrUn_... | Banana | extracellular | 22.7 | 52.32 |
Os01t0963000-01 | Rice | extracellular | 52.3 | 51.12 |
TraesCS3A01G509600.1 | Wheat | extracellular | 52.59 | 51.12 |
HORVU3Hr1G112040.1 | Barley | extracellular | 52.59 | 50.97 |
TraesCS3B01G578600.1 | Wheat | extracellular | 52.01 | 50.7 |
TraesCS3D01G517800.1 | Wheat | extracellular | 51.72 | 50.14 |
TraesCS7D01G066400.1 | Wheat | golgi | 51.15 | 49.72 |
TraesCS3D01G518200.1 | Wheat | extracellular | 51.15 | 49.72 |
TraesCS3D01G517000.1 | Wheat | extracellular | 51.15 | 49.17 |
EES02106 | Sorghum | extracellular, plastid | 51.15 | 49.17 |
HORVU7Hr1G013470.1 | Barley | extracellular | 50.57 | 49.03 |
TraesCSU01G103400.1 | Wheat | golgi | 50.0 | 49.01 |
TraesCSU01G103300.1 | Wheat | extracellular | 49.71 | 48.73 |
EES02102 | Sorghum | extracellular | 52.59 | 48.54 |
TraesCS3B01G578000.1 | Wheat | extracellular | 51.44 | 48.51 |
Zm00001d042022_P001 | Maize | extracellular | 50.29 | 48.48 |
TraesCS7A01G070900.1 | Wheat | extracellular | 49.71 | 47.79 |
TraesCS4A01G419300.1 | Wheat | golgi | 49.43 | 47.78 |
TraesCS3A01G510600.1 | Wheat | extracellular, vacuole | 50.29 | 47.68 |
KRH08650 | Soybean | endoplasmic reticulum | 46.84 | 47.25 |
Os01t0962700-01 | Rice | extracellular | 50.57 | 46.68 |
HORVU3Hr1G112350.1 | Barley | extracellular | 50.57 | 46.32 |
Zm00001d042019_P002 | Maize | extracellular | 47.13 | 46.2 |
TraesCS3B01G577900.1 | Wheat | extracellular | 50.0 | 45.55 |
KRH70265 | Soybean | cytosol | 22.99 | 45.45 |
TraesCS3A01G510900.1 | Wheat | cytosol | 52.59 | 45.41 |
TraesCS3D01G516900.1 | Wheat | extracellular | 47.13 | 44.93 |
KRH08651 | Soybean | extracellular | 43.68 | 43.93 |
HORVU3Hr1G112000.1 | Barley | extracellular | 45.69 | 43.09 |
KRH35106 | Soybean | extracellular | 43.39 | 42.9 |
TraesCS3A01G509100.1 | Wheat | extracellular | 46.84 | 42.34 |
TraesCS3A01G510300.1 | Wheat | extracellular | 43.39 | 40.05 |
KRH08653 | Soybean | endoplasmic reticulum | 39.37 | 39.71 |
GSMUA_Achr2P20510_001 | Banana | unclear | 54.6 | 27.98 |
HORVU3Hr1G111970.1 | Barley | cytosol, extracellular, plastid | 15.8 | 24.66 |
Protein Annotations
KEGG:00940+1.11.1.7 | Gene3D:1.10.420.10 | Gene3D:1.10.520.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009505 |
GO:GO:0009506 | GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016491 | GO:GO:0020037 |
GO:GO:0030312 | GO:GO:0042744 | GO:GO:0046872 | GO:GO:0055114 | GO:GO:0098869 | InterPro:Haem_peroxidase |
InterPro:Haem_peroxidase_pln/fun/bac | InterPro:IPR002016 | UniProt:K4BTH6 | PFAM:PF00141 | PRINTS:PR00458 | PRINTS:PR00461 |
ScanProsite:PS00435 | ScanProsite:PS00436 | PFscan:PS50873 | PANTHER:PTHR31235 | PANTHER:PTHR31235:SF157 | InterPro:Peroxidase_pln |
InterPro:Peroxidases_AS | InterPro:Peroxidases_heam-ligand_BS | SUPFAM:SSF48113 | InterPro:Secretory_peroxidase | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc04g071890.2 |
EnsemblPlants:Solyc04g071890.2.1 | UniParc:UPI0002766C00 | SEG:seg | : | : | : |
Description
Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4BTH6]
Coordinates
chr4:+:58913334..58915438
Molecular Weight (calculated)
38136.4 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.161
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSTTLSSFL LVLVLSFFVS EAQRPALTKG LSWSFYQSSC PQLESIIRNR LQKQIKDDVG QAAGLLRLHF HDCFVQGCDG SVLLDGSAGG PSEQTAIPNL
101: TLRKRSFKII DDLRKRIQDE CGQVVSCSDI VAIAARDSVV LTGGPNYDVP LGRKDGVNFA TEQATIDNLV APSANTTTVL SLLATKGLDA TDAVALSGAH
201: TIGISHCPSF TDRLYPNQDS TMDKTFANNL KGSCPTADSN NTVNMDIRSP NVFDNKYYVD LMNRQGLFTS DQDLYTDRRT RGIVTSFAVN QSLFYEKFVI
301: GMIKMGQMNV LTGGQGEIRN RCDRRNKAKK VDIATVVEEL EETFSALF
101: TLRKRSFKII DDLRKRIQDE CGQVVSCSDI VAIAARDSVV LTGGPNYDVP LGRKDGVNFA TEQATIDNLV APSANTTTVL SLLATKGLDA TDAVALSGAH
201: TIGISHCPSF TDRLYPNQDS TMDKTFANNL KGSCPTADSN NTVNMDIRSP NVFDNKYYVD LMNRQGLFTS DQDLYTDRRT RGIVTSFAVN QSLFYEKFVI
301: GMIKMGQMNV LTGGQGEIRN RCDRRNKAKK VDIATVVEEL EETFSALF
001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI
Arabidopsis Description
PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.