Factsheet for PGSC0003DMT400064553

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g071900.2.1	Tomato	extracellular	87.19	89.17
PGSC0003DMT400064555	Potato	cytosol	48.19	65.53
VIT_18s0072g00160.t01	Wine grape	cytosol, mitochondrion, plastid	58.5	63.25
PGSC0003DMT400064554	Potato	extracellular	61.0	62.93
Bra016127.1-P	Field mustard	extracellular, golgi	60.72	60.22
CDX96335	Canola	extracellular, golgi	60.72	60.22
CDX72818	Canola	extracellular, golgi, vacuole	60.45	59.94
Bra003918.1-P	Field mustard	extracellular, golgi	59.89	59.39
CDX68305	Canola	extracellular, golgi	59.89	59.39
AT1G71695.1	Thale cress	extracellular, golgi, vacuole	59.05	59.22
CDY53824	Canola	extracellular, golgi	59.61	59.12
GSMUA_Achr3P02950_001	Banana	extracellular	51.25	55.93
GSMUA_Achr10P...	Banana	extracellular	43.73	54.7
GSMUA_AchrUn_...	Banana	extracellular	22.28	52.98
Zm00001d042022_P001	Maize	extracellular	51.81	51.52
TraesCS3D01G517800.1	Wheat	extracellular	50.97	50.97
TraesCS3D01G517000.1	Wheat	extracellular	51.25	50.83
TraesCS3D01G518200.1	Wheat	extracellular	50.42	50.56
TraesCS3A01G509600.1	Wheat	extracellular	50.14	50.28
HORVU7Hr1G013470.1	Barley	extracellular	50.14	50.14
HORVU3Hr1G112040.1	Barley	extracellular	50.14	50.14
EES02106	Sorghum	extracellular, plastid	50.42	50.0
EES02102	Sorghum	extracellular	52.37	49.87
TraesCS3B01G578600.1	Wheat	extracellular	49.58	49.86
TraesCS7D01G066400.1	Wheat	golgi	49.3	49.44
TraesCS3A01G510600.1	Wheat	extracellular, vacuole	50.42	49.32
TraesCSU01G103400.1	Wheat	golgi	48.75	49.3
TraesCSU01G103300.1	Wheat	extracellular	48.47	49.01
TraesCS3B01G578000.1	Wheat	extracellular	50.14	48.78
TraesCS7A01G070900.1	Wheat	extracellular	49.03	48.62
Os01t0963000-01	Rice	extracellular	48.19	48.6
TraesCS4A01G419300.1	Wheat	golgi	48.47	48.33
KRH35106	Soybean	extracellular	46.8	47.73
KRH70265	Soybean	cytosol	23.4	47.73
KRH08651	Soybean	extracellular	45.96	47.69
Os01t0962700-01	Rice	extracellular	49.58	47.21
HORVU3Hr1G112350.1	Barley	extracellular	49.86	47.11
KRH08650	Soybean	endoplasmic reticulum	45.13	46.96
TraesCS3D01G516900.1	Wheat	extracellular	46.24	45.48
Zm00001d042019_P002	Maize	extracellular	44.85	45.35
TraesCS3B01G577900.1	Wheat	extracellular	48.19	45.29
TraesCS3A01G510900.1	Wheat	cytosol	50.42	44.91
HORVU3Hr1G112000.1	Barley	extracellular	43.73	42.55
TraesCS3A01G509100.1	Wheat	extracellular	44.29	41.3
KRH08653	Soybean	endoplasmic reticulum	37.6	39.13
TraesCS3A01G510300.1	Wheat	extracellular	40.95	38.99
GSMUA_Achr2P20510_001	Banana	unclear	52.37	27.69
HORVU3Hr1G111970.1	Barley	cytosol, extracellular, plastid	15.6	25.11

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:102585990	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114
GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1CCJ9	PFAM:PF00141
EnsemblPlantsGene:PGSC0003DMG402025083	PGSC:PGSC0003DMG402025083	EnsemblPlants:PGSC0003DMT400064553	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF157	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029684A4
RefSeq:XP_006359047.1	SEG:seg	:	:	:	:

Description

Peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG402025083]

Coordinates

chr4:+:61099775..61103157

Molecular Weight (calculated)

39720.1 Da

IEP (calculated)

7.735

GRAVY (calculated)

-0.188

Length

359 amino acids

Sequence
(BLAST)

001: MASTTLYTLA SSLVLILSIF VSIHFQVTKA QGTQPIVKGL SWTFYDSICP NAESIIRRRL QNVFRQDIGQ AAGLLRLHFH DCFVQGCDGS VLLDGSTSGP
101: SEKDAPPNLT LRQQAFRIIE DLRRRVHRDC GRVVSCADIT AIAARDSVFF SGGPDYDLPL GRRDGLTFAT LNETLANLPP PSFNTSLILA SLATKNFTPT
201: DVVALSGGHT IGISHCTSFT ERLYPNQDSS MDKTFANNLK ITCPTTNSTN TTVLDIRSPN KFDNKYYVDL MNRQGLFTSD QDLYTDRRTR GIVTSFAINE
301: SLFFQEFVNS MIKMGQLNVL TGTQGQIRAN CSVRNSNNYN LILPSSLGDQ EKQGTWSEI

Best Arabidopsis Sequence Match ( AT1G71695.1 )
(BLAST)

001: MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS
101: ASGPGEQSSI PNLTLRQQAF VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN NLPPPFFNAS QLIADFANRN
201: LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF
301: AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI

Arabidopsis Description

PER12Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WB34]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.