Factsheet for TraesCS3A01G448600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 3
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G484800.1	Wheat	extracellular, vacuole	82.94	89.1
TraesCS3B01G484900.1	Wheat	extracellular, vacuole	82.72	88.86
TraesCS3D01G441100.1	Wheat	cytosol	65.87	85.67
HORVU3Hr1G097150.1	Barley	mitochondrion, plasma membrane, plastid	44.28	77.07
TraesCS3A01G468500.1	Wheat	extracellular, plasma membrane	60.69	65.81
GSMUA_Achr8P22010_001	Banana	extracellular	31.1	39.34
TraesCS3A01G471700.1	Wheat	extracellular	30.89	38.86
TraesCS3A01G040800.1	Wheat	extracellular, vacuole	28.94	38.4
TraesCS3A01G471900.1	Wheat	extracellular, golgi	32.4	37.41
TraesCS3A01G472000.1	Wheat	extracellular	33.26	36.84
TraesCS3A01G472300.1	Wheat	extracellular, vacuole	33.69	36.79
TraesCS3A01G471500.1	Wheat	cytosol	29.16	35.43
TraesCS3A01G472100.1	Wheat	extracellular	31.75	35.34
TraesCS3A01G411900.1	Wheat	mitochondrion	28.29	33.5
TraesCS3A01G471400.1	Wheat	extracellular	25.49	33.15
TraesCS3A01G472500.1	Wheat	golgi, mitochondrion, plastid, vacuole	31.53	31.67
TraesCS3A01G471800.1	Wheat	endoplasmic reticulum, mitochondrion, plastid, vacuole	30.45	31.4
TraesCS3A01G411700.1	Wheat	plastid	32.4	29.94
AT5G48430.1	Thale cress	extracellular, plasma membrane	24.62	28.08
TraesCS1A01G251900.1	Wheat	endoplasmic reticulum, extracellular	26.35	28.05
CDY00058	Canola	extracellular, plasma membrane	24.19	27.79
Bra036172.1-P	Field mustard	extracellular, plasma membrane	24.19	27.79
CDY19949	Canola	plasma membrane	23.76	27.3

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109
InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF291	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N
EnsemblPlantsGene:TraesCS3A01G448600	EnsemblPlants:TraesCS3A01G448600.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:+:688596498..688597889

Molecular Weight (calculated)

48666.0 Da

IEP (calculated)

7.923

GRAVY (calculated)

0.049

Length

463 amino acids

Sequence
(BLAST)

001: MTKTQIHQSV NYSMQARGMS QQRRRSAAAA ALLALAVLLG TSPPDAAAQQ GPAWRPLVAR VNKDAATSLY TIAIKDGGGP LLLDLAGPML WVANCPCTHW
101: AIGCGGSHCD GFRNMFTPDA CDSAEWPAQG QDTCICTALP YNPVDGRCVA AQATTISIAA NTTDGKNPLS PVTFPVVGSC APGDFLASLP EGVAGVAGLA
201: RLRNSLPLQV AQWYSLKQEF ALCLPRGGDG VAVFGGGPFQ LLAAPTVELA DSLRKKPLPF LFNPKNRAYY FTITGIAVNQ QRVPTPPGAF DLERRGQGGA
301: AFSTVTPYTA LRWDVYWPLR NAFDAATSGI ARADKVAPFD MCYQASELAM TSVGYAVASI DLMLDGGQNW TLPGASSLVQ VNDRTVCFAF VQTDSSVPAH
401: AESPAVILGG HQLENNLLMF DRTRTRSRSV GCCSASALPA ATSTSASGVL RSSSVTDLAS RAS

Best Arabidopsis Sequence Match ( AT5G48430.1 )
(BLAST)

001: MEKSLLVLCL ILFFTYSYVS ANYYPPKALV STVSKNTILP IFTFTLNTNQ EFFIHIGGPY LVRKCNDGLP RPIVPCGSPV CALTRRFTPH QCSLPSNKII
101: NGVCACQATA FEPFQRICNS DQFTYGDLSI SSLKPISPSV TINNVYYLCI PQPFLVDFPP GVFGLAGLAP TALATWNQLT RPRLGLEKKF ALCLPSDENP
201: LKKGAIYFGG GPYKLRNIDA RSMLSYTRLI TNPRKLNNYF LGLKGISVNG NRILFAPNAF AFDRNGDGGV TLSTIFPFTM LRSDIYRVFI EAFSQATSGI
301: PRVSSTTPFE FCLSTTTNFQ VPRIDLELAN GVIWKLSPAN AMKKVSDDVA CLAFVNGGDA AAQAVMIGIH QMENTLVEFD VGRSAFGFSS SLGLVSASCG
401: DFQTRP

Arabidopsis Description

At5g48430 [Source:UniProtKB/TrEMBL;Acc:Q9LV70]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.