Factsheet for TraesCS3A01G471800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, vacuole

Predictor Summary:

mitochondrion 2
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G515000.1	Wheat	endoplasmic reticulum	96.66	96.66
TraesCS3A01G411900.1	Wheat	mitochondrion	62.58	71.87
TraesCS3A01G472500.1	Wheat	golgi, mitochondrion, plastid, vacuole	67.48	65.73
Os01t0937800-00	Rice	extracellular	60.8	62.9
Os01t0937600-01	Rice	extracellular	59.69	60.63
Os01t0937500-01	Rice	extracellular	58.8	59.59
TraesCS3A01G471700.1	Wheat	extracellular	31.63	38.59
TraesCS3A01G471900.1	Wheat	extracellular, golgi	32.74	36.66
TraesCS3A01G472000.1	Wheat	extracellular	33.41	35.89
TraesCS3A01G472100.1	Wheat	extracellular	33.18	35.82
GSMUA_Achr8P22010_001	Banana	extracellular	28.95	35.52
TraesCS3A01G472300.1	Wheat	extracellular, vacuole	32.74	34.67
TraesCS3A01G468500.1	Wheat	extracellular, plasma membrane	32.96	34.66
TraesCS3A01G040800.1	Wheat	extracellular, vacuole	26.5	34.1
TraesCS3A01G471400.1	Wheat	extracellular	26.73	33.71
TraesCS3A01G471500.1	Wheat	cytosol	28.51	33.6
TraesCS3A01G448600.1	Wheat	mitochondrion, plastid	31.4	30.45
TraesCS1A01G251900.1	Wheat	endoplasmic reticulum, extracellular	28.95	29.89
TraesCS3A01G411700.1	Wheat	plastid	31.63	28.34
CDY00058	Canola	extracellular, plasma membrane	25.17	28.04
AT5G48430.1	Thale cress	extracellular, plasma membrane	25.17	27.83
CDY19949	Canola	plasma membrane	24.94	27.79
Bra036172.1-P	Field mustard	extracellular, plasma membrane	24.72	27.54

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109
InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PFscan:PS51257	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF341	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	EnsemblPlantsGene:TraesCS3A01G471800	EnsemblPlants:TraesCS3A01G471800.1	InterPro:Xylanase_inhibitor_I-like	TIGR:cd05489	SEG:seg

Description

No Description!

Coordinates

chr3A:-:703183355..703184996

Molecular Weight (calculated)

48151.0 Da

IEP (calculated)

8.239

GRAVY (calculated)

0.006

Length

449 amino acids

Sequence
(BLAST)

001: MADQAKLSRH NPYTNHVFHR VIISALVLLL SCTAATSDRQ PPLISQLAKD PETSLYTISV KADKSPLLLD LAGSLVWSTC PPSSAHSTVP CESDTCAVAK
101: QQSSHRCRYV DGGRFWENRE PGPSWCACAA RPLNPVTGQC STGDLTSLTM KANTTNGTME LRPEESFAVV GACAPGRLLG SLPAGAAGVA GLSRRSLSLP
201: SQLVAQRGFG RKFSLCLPAF ATFGDTPVYL PTPERGFIDY TTSIPYTPLL TNPANAGGYY IPVKGISASW HGADAAAALP RGALDIDVRT GRGGVVLSTA
301: TPYTVMRPDV FRAFAKAFDH AIIRGKVSFM ERVPATKPFE LCYNGAFPML KRAGLDMPYI KLELGDGATR NWTLFNDNYM VPVDGAMCVG ILPMGPDGMP
401: VDGEPAVVIG GKQLENNLLV FDLEKQVLGF SMLLSVQLSG CRSSYFFRN

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.