Factsheet for TraesCS3B01G032200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plasma membrane 2
extracellular 2
endoplasmic reticulum 2
golgi 2
vacuole 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G005090.1	Barley	cytosol	45.6	56.22
TraesCS6A01G044800.1	Wheat	cytosol	74.27	49.89
TraesCS6B01G463400.1	Wheat	endoplasmic reticulum	27.04	45.6
TraesCS3B01G031900.1	Wheat	endoplasmic reticulum	83.06	43.52
TraesCS6B01G447300.1	Wheat	cytosol	39.09	43.17
TraesCS6B01G463800.1	Wheat	cytosol	35.18	40.6
TraesCS6B01G464100.1	Wheat	cytosol	25.41	39.8
TraesCS6B01G428200.1	Wheat	cytosol	16.61	38.35
TraesCS7B01G460200.2	Wheat	cytosol	33.88	37.41
TraesCS3B01G066500.1	Wheat	peroxisome, plastid	33.22	37.23
TraesCS7B01G320600.1	Wheat	endoplasmic reticulum	41.04	35.49
TraesCS7B01G016600.1	Wheat	mitochondrion	27.04	35.02
TraesCS5B01G554200.1	Wheat	cytosol	13.03	30.53

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43889
PANTHER:PTHR43889:SF37	InterPro:RX-like_CC	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS3B01G032200	EnsemblPlants:TraesCS3B01G032200.1	TIGR:cd14798

Description

No Description!

Coordinates

chr3B:-:14702451..14703844

Molecular Weight (calculated)

35048.6 Da

IEP (calculated)

5.316

GRAVY (calculated)

-0.230

Length

307 amino acids

Sequence
(BLAST)

001: MEAAVVSVSH GAIGFMIAKL GDLLAGKYKL LKQAKGEIMF LKAELESMRA FLERMSEAEE EPDKQAKCWA NEVRDLSYDI EDSVDEFMLL VEGESNGEPH
101: GFKGFIHRSM NLLTTMNTRQ KVGKEFQGLK SRVMEVSERR MRYKIDDAVS KPNNTTIDIR MLALYADTSG LVGIDGLRDE LIHLMVGEEG VSAQQRKVLS
201: IEGFGGLGKT TLANQIYHRL KWQYECQAFV SVSQKPNIRM ILRRMLSQVG YVALEGTNME IWAEDEMISA LRQFLMDKRY LIVIDDIWDE TTWNVIRCAL
301: PENIYVR

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.