Factsheet for TraesCS3B01G066500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, peroxisome

Predictor Summary:

plasma membrane 1
extracellular 1
endoplasmic reticulum 1
golgi 1
vacuole 1
peroxisome 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G305700.1	Wheat	peroxisome	56.57	49.36
TraesCSU01G018700.1	Wheat	cytosol	52.19	48.97
Os12t0272800-01	Rice	extracellular, plastid	17.88	40.16
TraesCS6B01G447300.1	Wheat	cytosol	34.67	34.17
TraesCS7B01G460200.2	Wheat	cytosol	34.67	34.17
TraesCS6B01G463800.1	Wheat	cytosol	32.85	33.83
TraesCS6B01G464100.1	Wheat	cytosol	24.09	33.67
TraesCS7B01G016600.1	Wheat	mitochondrion	28.83	33.33
TraesCS3B01G032200.1	Wheat	cytosol	37.23	33.22
TraesCS6B01G463400.1	Wheat	endoplasmic reticulum	20.8	31.32
TraesCS7B01G320600.1	Wheat	endoplasmic reticulum	39.05	30.14
TraesCS6B01G428200.1	Wheat	cytosol	14.6	30.08
TraesCS5B01G554200.1	Wheat	cytosol	13.87	29.01
TraesCS3B01G031900.1	Wheat	endoplasmic reticulum	38.32	17.92
Os12t0270300-01	Rice	plasma membrane	26.64	8.12

Protein Annotations

EnsemblPlants:TraesCS3B01G066500.1	EnsemblPlantsGene:TraesCS3B01G066500	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR44382	PFAM:PF00931
SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3B:-:39603450..39604274

Molecular Weight (calculated)

30817.3 Da

IEP (calculated)

9.859

GRAVY (calculated)

-0.340

Length

274 amino acids

Sequence
(BLAST)

001: MEGVVATAVT GAMRALLPKF AELLASKYKL SSGVHKQIVS LQNEMSTMNA LLVKLSRVAA LDEQQRDWRD KVRELSYDME DCVDIFTHDL NGGDHGSKAW
101: LKRGLRKIKT RHKIASRIEE LKARALEVSS CHHRYKIDEC TPSHGGMVAI DSRMEALYLD ANNLVGIDGP REKLIKLLSR GQEGANRLRV AAVVGSGGMG
201: KTTLAHQVYT KIKSQFDCKA FVTVSQNPST FKILSDIYQG FRGWELPPFL NDEHRLIFSL REYLKDKRYA LSHA

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.