Factsheet for TraesCS3B01G042800.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G039400.1	Wheat	unclear	94.08	93.56
TraesCS3B01G042700.1	Wheat	extracellular, golgi	86.76	88.51
HORVU3Hr1G006440.1	Barley	cytosol, nucleus, plastid	71.83	68.36
EES10290	Sorghum	extracellular	59.15	56.76
Zm00001d007753_P001	Maize	extracellular	57.75	53.39
TraesCS3B01G514700.1	Wheat	extracellular	57.18	47.76
TraesCS3B01G513500.1	Wheat	extracellular	55.21	46.12
EES04185	Sorghum	endoplasmic reticulum, plasma membrane	53.24	43.85
Zm00001d042179_P001	Maize	extracellular	52.11	43.12
TraesCS3B01G514600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	48.45	40.57
TraesCS3B01G514500.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	41.69	40.11
TraesCS3B01G515300.1	Wheat	extracellular	45.63	38.94
TraesCS3B01G515200.1	Wheat	extracellular	43.94	38.05
TraesCS3B01G514800.1	Wheat	golgi	40.85	36.07
TraesCS3B01G514900.1	Wheat	extracellular	40.85	35.89
TraesCS3B01G445200.1	Wheat	extracellular	41.97	35.82
TraesCS3B01G515100.1	Wheat	golgi	41.13	35.7
Os01t0937000-01	Rice	extracellular	39.15	35.19
TraesCS3B01G510300.1	Wheat	extracellular	41.13	34.35
TraesCS3B01G515500.1	Wheat	golgi, vacuole	39.44	33.1
TraesCS3B01G484800.1	Wheat	extracellular, vacuole	39.44	32.48
TraesCS3B01G484900.1	Wheat	extracellular, vacuole	39.15	32.25
GSMUA_Achr8P22010_001	Banana	extracellular	31.27	30.33
TraesCS3B01G515700.1	Wheat	extracellular, mitochondrion, plastid, vacuole	33.8	26.73
TraesCS3B01G515000.1	Wheat	endoplasmic reticulum	32.39	25.61
TraesCS1B01G263100.1	Wheat	endoplasmic reticulum, extracellular	30.14	24.6
AT5G48430.1	Thale cress	extracellular, plasma membrane	27.04	23.65
Bra036172.1-P	Field mustard	extracellular, plasma membrane	26.48	23.33
CDY19949	Canola	plasma membrane	26.2	23.08
CDY00058	Canola	extracellular, plasma membrane	26.2	23.08

Protein Annotations

Gene3D:2.40.70.10	MapMan:35.1	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109
PFAM:PF14541	PFAM:PF14543	PANTHER:PTHR13683	PANTHER:PTHR13683:SF368	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	EnsemblPlantsGene:TraesCS3B01G042800	EnsemblPlants:TraesCS3B01G042800.1	SEG:seg

Description

No Description!

Coordinates

chr3B:-:22129308..22130549

Molecular Weight (calculated)

35700.8 Da

IEP (calculated)

9.259

GRAVY (calculated)

0.355

Length

355 amino acids

Sequence
(BLAST)

001: MGQSKPVLVL LLLAVSTAAS SGKPLLTKIT KGGAATALYT APLSAGRPLV LDLSAPAITT PCSGQTTTVT LSANSTDGSN PLSLVSLAAT ATCAAAPSGA
101: VGVAGLARSS ASFPAQVAST QKVANSFALC LPSDGRTGFT GNGVGAAIFG GGPFFLAPPA DRPSITTLLS DGVPLRQPFA GNPGYFVSAT NGIAIDGTRV
201: AVSGTGALVV GLSTTISYAQ LRADVYRPFI TAFDRAMGSS AKVAAVAPFE LCYDSSKLAP TRFGYLVPNV DLMLEGGTNW TVVGGNSMAQ VNSGTACFAF
301: VRSGSTDATP ALVIGGFQME NKLVVLDNGK KTLSFTQNLP GMGFSCSNFN FTKAA

Best Arabidopsis Sequence Match ( AT1G03230.1 )
(BLAST)

001: MASSRIIIFS VLLLSIFSLS SSAQPSFRPK ALLLPVTKDP STLQYTTVIN QRTPLVPASV VFDLGGREFW VDCDQGYVST TYRSPRCNSA VCSRAGSIAC
101: GTCFSPPRPG CSNNTCGAFP DNSITGWATS GEFALDVVSI QSTNGSNPGR FVKIPNLIFS CGSTSLLKGL AKGAVGMAGM GRHNIGLPLQ FAAAFSFNRK
201: FAVCLTSGRG VAFFGNGPYV FLPGIQISRL QKTPLLINPG TTVFEFSKGE KSPEYFIGVT AIKIVEKTLP IDPTLLKINA STGIGGTKIS SVNPYTVLES
301: SIYKAFTSEF IRQAAARSIK RVASVKPFGA CFSTKNVGVT RLGYAVPEIQ LVLHSKDVVW RIFGANSMVS VSDDVICLGF VDGGVNPGAS VVIGGFQLED
401: NLIEFDLASN KFGFSSTLLG RQTNCANFNF TSTA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS5]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.