Factsheet for TraesCS3D01G039400.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G042800.1	Wheat	unclear	93.56	94.08
TraesCS3D01G039300.1	Wheat	extracellular, vacuole	89.08	91.12
HORVU3Hr1G006440.1	Barley	cytosol, nucleus, plastid	70.87	67.83
EES10290	Sorghum	extracellular	59.38	57.3
Zm00001d007753_P001	Maize	extracellular	58.54	54.43
TraesCS3D01G466500.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	55.74	46.39
EES04185	Sorghum	endoplasmic reticulum, plasma membrane	54.62	45.24
TraesCS3D01G467100.1	Wheat	extracellular	53.22	44.71
TraesCS3D01G467200.1	Wheat	extracellular, vacuole	53.5	44.63
Zm00001d042179_P001	Maize	extracellular	52.94	44.06
TraesCS3D01G467800.1	Wheat	extracellular	23.81	41.67
TraesCS3D01G467400.1	Wheat	cytosol, plastid	22.13	40.31
TraesCS3D01G467900.1	Wheat	extracellular	44.26	38.82
TraesCS3D01G467700.1	Wheat	extracellular	43.7	37.32
TraesCS3D01G405900.1	Wheat	extracellular	42.3	36.3
TraesCS3D01G467600.1	Wheat	extracellular, vacuole	41.46	36.27
TraesCS3D01G461400.1	Wheat	extracellular	42.86	35.83
TraesCS3D01G467500.1	Wheat	extracellular, golgi	40.34	35.73
TraesCS3D01G467300.1	Wheat	extracellular	40.34	35.73
Os01t0937000-01	Rice	extracellular	39.5	35.7
TraesCS3D01G441100.1	Wheat	cytosol	33.33	33.43
TraesCS3D01G468100.1	Wheat	extracellular, vacuole	38.94	32.86
GSMUA_Achr8P22010_001	Banana	extracellular	32.49	31.69
TraesCS3D01G468200.1	Wheat	mitochondrion, plastid	26.61	29.97
TraesCS3D01G468300.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	33.61	26.55
Bra036172.1-P	Field mustard	extracellular, plasma membrane	27.45	24.32
AT5G48430.1	Thale cress	extracellular, plasma membrane	27.45	24.14
CDY00058	Canola	extracellular, plasma membrane	27.17	24.07
CDY19949	Canola	plasma membrane	27.17	24.07
TraesCS1D01G251700.1	Wheat	extracellular, golgi	28.01	22.94

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109
PFAM:PF14541	PFAM:PF14543	PANTHER:PTHR13683	PANTHER:PTHR13683:SF368	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	EnsemblPlantsGene:TraesCS3D01G039400	EnsemblPlants:TraesCS3D01G039400.1	SEG:seg

Description

No Description!

Coordinates

chr3D:+:14998882..14999955

Molecular Weight (calculated)

36075.2 Da

IEP (calculated)

9.680

GRAVY (calculated)

0.299

Length

357 amino acids

Sequence
(BLAST)

001: MWQSKPVLLL LLLAVTTAAT SGKPLLTKIT KGAASTALYT APLSAGRPLV LDLSAPAITT PCSGQTTTVT LSANSTDGSN PLSPVSFAAT ATCAAAPSGA
101: VGVAGLARSS ASFPAQVAST QKVANSFALC LPSDGRTGFS GNGVGAAIFG GGPFFLAPPA DRPSITTLLS DGVPLRQPFA GNPGYFVTAT NGIAIDGTRV
201: TVSGSGALVV GLSTTIPYAQ LRSDVYRPFI TAFDRAMGSS AKVAAVKPFE LCYDSSKLAP TRFGYLVPNV DVMLEGGTNW TVVGGNSMAQ VNSGTACFAF
301: VRSGGSTGGA TPALVIGGFQ MENKLVVLDN GKKTLSFTQN LPGMGFSCSN FNFTRAG

Best Arabidopsis Sequence Match ( AT1G03230.1 )
(BLAST)

001: MASSRIIIFS VLLLSIFSLS SSAQPSFRPK ALLLPVTKDP STLQYTTVIN QRTPLVPASV VFDLGGREFW VDCDQGYVST TYRSPRCNSA VCSRAGSIAC
101: GTCFSPPRPG CSNNTCGAFP DNSITGWATS GEFALDVVSI QSTNGSNPGR FVKIPNLIFS CGSTSLLKGL AKGAVGMAGM GRHNIGLPLQ FAAAFSFNRK
201: FAVCLTSGRG VAFFGNGPYV FLPGIQISRL QKTPLLINPG TTVFEFSKGE KSPEYFIGVT AIKIVEKTLP IDPTLLKINA STGIGGTKIS SVNPYTVLES
301: SIYKAFTSEF IRQAAARSIK RVASVKPFGA CFSTKNVGVT RLGYAVPEIQ LVLHSKDVVW RIFGANSMVS VSDDVICLGF VDGGVNPGAS VVIGGFQLED
401: NLIEFDLASN KFGFSSTLLG RQTNCANFNF TSTA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS5]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.