Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G380000.1 | Wheat | mitochondrion | 88.33 | 88.33 |
| TraesCS3A01G389700.1 | Wheat | mitochondrion | 87.5 | 87.87 |
| HORVU3Hr1G081860.9 | Barley | mitochondrion | 79.58 | 68.46 |
| TraesCS1B01G278200.2 | Wheat | nucleus | 9.58 | 12.17 |
| TraesCS3B01G419000.1 | Wheat | nucleus | 9.58 | 11.22 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G419100.1 | EnsemblPlantsGene:TraesCS3B01G419100 | Gene3D:3.30.450.50 | PANTHER:PTHR21136 | PANTHER:PTHR21136:SF88 | SEG:seg |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:655638430..655639152
Molecular Weight (calculated)
26678.3 Da
IEP (calculated)
8.513
GRAVY (calculated)
-0.422
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRRSNPRG FVVSRLEAMK EATAGVSEGD GLESSVFFFV AVTSRAKKDR LSYFRSSEVG EDAEASRALA ALCLDHAPEH HRWHHHTYDG RRTFAVLAAD
101: DGRTYLAVAE PTPGSSEVVR FLERVRDTCN AMPRRRLRDE AVSGLVRQFA QTLQAGTSSS AAANSMVFPG DGSWSEHASD KDEEAQPEDG APRRRPGRPS
201: WRRTWWRRHA MAVIGVDVVL CLVLFGVWMA VCHGFSCVQR
101: DGRTYLAVAE PTPGSSEVVR FLERVRDTCN AMPRRRLRDE AVSGLVRQFA QTLQAGTSSS AAANSMVFPG DGSWSEHASD KDEEAQPEDG APRRRPGRPS
201: WRRTWWRRHA MAVIGVDVVL CLVLFGVWMA VCHGFSCVQR
001: MGSIQNTVHY CCVSRDNQIM YAYNNAGDHR NNESLAALCL EKTPPFHKWY FETRGRSNKQ DKKKGRDHAH SLRGIEIEEH RKSNDRGNVT ECSNASSESA
101: TYVPRRGRSG GSQSIERKWR RQVKIVLAID IAICLTLLGV WLAICHGIEC TRS
101: TYVPRRGRSG GSQSIERKWR RQVKIVLAID IAICLTLLGV WLAICHGIEC TRS
Arabidopsis Description
PHYL1.2Phytolongin Phyl1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WF5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.