Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G419100.1 | Wheat | mitochondrion | 87.87 | 87.5 |
| TraesCS3D01G380000.1 | Wheat | mitochondrion | 87.45 | 87.08 |
| HORVU3Hr1G081860.9 | Barley | mitochondrion | 79.92 | 68.46 |
| TraesCS1A01G267300.1 | Wheat | nucleus | 10.04 | 12.83 |
| TraesCS3A01G389800.1 | Wheat | cytosol | 9.21 | 10.73 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G389700.1 | EnsemblPlantsGene:TraesCS3A01G389700 | Gene3D:3.30.450.50 | PANTHER:PTHR21136 | PANTHER:PTHR21136:SF88 | SEG:seg |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:638200337..638201056
Molecular Weight (calculated)
26343.0 Da
IEP (calculated)
7.566
GRAVY (calculated)
-0.319
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MISRRSNPSG FVVSRLEAMK EAAAGASEGD GLESSVFFCV AVTSRGKDRL SYFRSSEVGE DAEASRALAA LCLDHAPEHH QWHHHTYDGR RTFAVLAADD
101: GRTYLAVAEP TPGSTEVVRF LERVRDTCGS APRRRLRDEA VSGLVRQFVQ TLQAGMSSSA AANSVMLPGD GSWSEHTSDK DEEALPEEGA PRRRPARPSW
201: RRTWWRRHAM AVIGVDVVLC LVLFGVWMAV CHGFSCVQR
101: GRTYLAVAEP TPGSTEVVRF LERVRDTCGS APRRRLRDEA VSGLVRQFVQ TLQAGMSSSA AANSVMLPGD GSWSEHTSDK DEEALPEEGA PRRRPARPSW
201: RRTWWRRHAM AVIGVDVVLC LVLFGVWMAV CHGFSCVQR
001: MGSIQNTVHY CCVSRDNQIM YAYNNAGDHR NNESLAALCL EKTPPFHKWY FETRGKKTFG FLMKDDFVYF AIVDDVFKKS SVLDFLEKLR DELKEANKKN
101: SRGSFSGSIS FSNVQDQIVR RLIASLEFDH TCLPLSSPSI DGAEQSYASN SKAPLLGRSN KQDKKKGRDH AHSLRGIEIE EHRKSNDRGN VTECSNASSE
201: SATYVPRRGR SGGSQSIERK WRRQVKIVLA IDIAICLTLL GVWLAICHGI ECTRS
101: SRGSFSGSIS FSNVQDQIVR RLIASLEFDH TCLPLSSPSI DGAEQSYASN SKAPLLGRSN KQDKKKGRDH AHSLRGIEIE EHRKSNDRGN VTECSNASSE
201: SATYVPRRGR SGGSQSIERK WRRQVKIVLA IDIAICLTLL GVWLAICHGI ECTRS
Arabidopsis Description
PHYL1.2Phytolongin Phyl1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WF5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.