Factsheet for TraesCS4A01G359900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G512900.1	Wheat	plasma membrane	99.63	99.63
TraesCS4A01G360000.1	Wheat	plasma membrane	99.63	99.63
TraesCS5B01G512100.1	Wheat	plasma membrane	99.81	99.44
TraesCS5B01G512000.1	Wheat	plasma membrane	99.63	99.44
TraesCS5D01G513000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	81.34	99.09
HORVU5Hr1G117080.1	Barley	golgi, vacuole	99.07	88.21
Os10t0444700-02	Rice	plasma membrane	88.06	87.25
EER91556	Sorghum	plasma membrane	85.63	84.84
Zm00001d032850_P001	Maize	plasma membrane	85.07	84.29
Zm00001d014116_P001	Maize	plasma membrane	72.39	84.16
TraesCS4A01G416100.1	Wheat	plasma membrane	79.85	79.85
TraesCS5A01G460300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	77.24	76.95
TraesCS5A01G504400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	73.32	75.14
TraesCS2A01G047300.1	Wheat	plasma membrane	75.56	74.59
TraesCS4A01G416300.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	67.72	72.46
TraesCS4A01G416400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	69.78	71.78
TraesCS4A01G416500.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	69.59	71.05
TraesCS4A01G416600.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	69.4	70.86
TraesCS6A01G223800.1	Wheat	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	61.94	62.29
TraesCS4A01G418300.1	Wheat	plasma membrane	56.53	57.06
TraesCS2A01G047400.1	Wheat	mitochondrion, plasma membrane	53.73	57.03
TraesCS4A01G417900.1	Wheat	mitochondrion	44.03	56.06
TraesCS4A01G301100.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	57.09	55.23
TraesCS7A01G070000.1	Wheat	mitochondrion	56.9	54.86
TraesCS4A01G418400.1	Wheat	mitochondrion	56.34	54.32
TraesCS4A01G418000.1	Wheat	mitochondrion	56.34	54.22
TraesCS7A01G226600.1	Wheat	plasma membrane	49.81	47.34

Protein Annotations

MapMan:24.2.2.6	MapMan:25.3.2.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005315	GO:GO:0005575
GO:GO:0006810	GO:GO:0006817	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PFscan:PS50850	PANTHER:PTHR24064	PANTHER:PTHR24064:SF262	InterPro:Phos_permease	SUPFAM:SSF103473	TIGRFAMs:TIGR00887
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G359900	EnsemblPlants:TraesCS4A01G359900.1	TIGR:cd06174	SEG:seg	:

Description

No Description!

Coordinates

chr4A:+:632989683..632991293

Molecular Weight (calculated)

58497.3 Da

IEP (calculated)

7.857

GRAVY (calculated)

0.370

Length

536 amino acids

Sequence
(BLAST)

001: MARSEQQGLQ VLSALDAAKT QWYHFTAIVV AGMGFFTDAY DLFCISLVTK LLGRIYYTDL SKPDPGTLPP GVAAAVNGVA FCGTLAGQLF FGWLGDKMGR
101: KSVYGMTLIL MVICSIGSGL SFAHTPKSVM ATLCFFRFWL GFGIGGDYPL SATIMSEYAN KKTRGAFIAA VFAMQGFGIL AGGIVTLIIS SAFRAGFHEP
201: AYQDDRVAST GTEADFVWRI ILMLGALPAL LTYYWRMKMP ETARYTALVA KNAKLAAADM SKVLQVELED ETEKMDEMVS RGANDFGLFS PQFARRHGLH
301: LVGTATTWFL LDIAFYSQNL FQKDIFTSIN WIPKARTMSA LDEVFRISRA QTLIALCGTV PGYWFTVFLI DVVGRFAIQL MGFFMMTVFM LGLAVPYHHW
401: TTPGNQIGFV VMYAFTFFFA NFGPNATTFV VPAEIFPARL RSTCHGISAA AGKAGAMIGA FGFLYAAQDP HKPDAGYRPG IGVRNSLFVL AGVNLLGFMF
501: TFLVPEANGK SLEEMSGEAQ DNEDQARAAA VQPSMA

Best Arabidopsis Sequence Match ( AT2G38940.1 )
(BLAST)

001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV

Arabidopsis Description

PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.