CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
peroxisome 1
plasma membrane 4
endoplasmic reticulum 1
vacuole 1
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032850_P001	Maize	plasma membrane	95.75	95.75
Zm00001d014116_P001	Maize	plasma membrane	80.78	94.79
Os10t0444700-02	Rice	plasma membrane	87.43	87.43
TraesCS4A01G359900.1	Wheat	plasma membrane	84.84	85.63
TraesCS5D01G512900.1	Wheat	plasma membrane	84.66	85.45
TraesCS4A01G360000.1	Wheat	plasma membrane	84.66	85.45
TraesCS5B01G512100.1	Wheat	plasma membrane	84.84	85.32
TraesCS5B01G512000.1	Wheat	plasma membrane	84.66	85.29
TraesCS5D01G513000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	68.58	84.32
EER95493	Sorghum	plasma membrane	80.96	81.87
OQU80695	Sorghum	cytosol, plasma membrane, vacuole	77.45	77.45
EER94156	Sorghum	plasma membrane	74.68	77.39
HORVU5Hr1G117080.1	Barley	golgi, vacuole	85.21	76.58
EER92843	Sorghum	cytosol, golgi, plasma membrane	73.2	75.86
OQU81206	Sorghum	plasma membrane	73.01	73.69
KXG40235	Sorghum	plasma membrane	71.16	71.16
EER98411	Sorghum	plasma membrane	61.0	61.0
EES10479	Sorghum	mitochondrion, plasma membrane	55.27	58.63
EES03373	Sorghum	plasma membrane	58.6	57.22
EES11845	Sorghum	mitochondrion	56.01	55.6
EER88333	Sorghum	cytosol, mitochondrion, plasma membrane, plastid	48.98	46.25
OQU87272	Sorghum	plasma membrane	49.91	39.13

Protein Annotations

MapMan:24.2.2.6	MapMan:25.3.2.1	EntrezGene:8071389	UniProt:C5X0E3	ncoils:Coil	EnsemblPlants:EER91556
ProteinID:EER91556	ProteinID:EER91556.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005315	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006817	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0022891	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PFscan:PS50850	PANTHER:PTHR24064
PANTHER:PTHR24064:SF262	InterPro:Phos_permease	EnsemblPlantsGene:SORBI_3001G234800	SUPFAM:SSF103473	unigene:Sbi.15699	TIGRFAMs:TIGR00887
TMHMM:TMhelix	UniParc:UPI0001A81F53	RefSeq:XP_002464558.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:23246048..23248072

Molecular Weight (calculated)

58782.5 Da

IEP (calculated)

7.819

GRAVY (calculated)

0.370

Length

541 amino acids

Sequence
(BLAST)

001: MARGGDGLQV LSALDAAKTQ WYHFTAIIVA GMGFFTDAYD LFCISLVTKL LGRIYYTDTS KDNPGSLPPN VAAAVNGVAF CGTLAGQLFF GWLGDKLGRK
101: SVYGMTLMLM VICSIASGLS FGHTPTGVMA TLCFFRFWLG FGIGGDYPLS ATIMSEYANK KTRGAFIAAV FAMQGFGILA GGIVTLIISA AFRAGYPAPA
201: YKDDHFNSTV PQSDFVWRII LMLGALPALL TYYWRMKMPE TARYTALVAK NAKQAAADMS KVLHTEIVDE QEKLDQMVTA ESNTFGLFSR EFARRHGLHL
301: VGTATTWFLL DIAFYSQNLF QKDIFTAINW IPKANTMSAL EEVFRISRAQ TLIALCGTVP GYWFTVALID VVGRFAIQLL GFFMMTVFML GLAIPYHHWT
401: TAGNHIGFVV MYGFTFFFAN FGPNSTTFIV PAEIFPARLR STCHGISAAS GKAGAIIGAF GFLYAAQNQD KSKADAGYPA GIGVRNSLFV LAGCNMLGFV
501: LTFLVPESKG KSLEEMSGEA DDAEEEAVGA RAVRPSETQM V

Best Arabidopsis Sequence Match ( AT2G38940.1 )
(BLAST)

001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV

Arabidopsis Description

PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.