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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027549_P001 Maize plasma membrane 92.42 92.08
TraesCS5A01G504400.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 80.78 83.56
TraesCS4D01G329900.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 80.78 82.77
TraesCS4B01G333700.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 80.59 82.58
Os03t0136400-01 Rice plasma membrane 80.22 82.51
HORVU4Hr1G080730.2 Barley endoplasmic reticulum, peroxisome 79.85 79.27
GSMUA_Achr6P30290_001 Banana cytosol, plasma membrane, vacuole 63.77 77.18
OQU80695 Sorghum cytosol, plasma membrane, vacuole 74.12 74.12
EER91556 Sorghum plasma membrane 71.16 71.16
EER94156 Sorghum plasma membrane 68.02 70.5
EER95493 Sorghum plasma membrane 69.5 70.28
EER92843 Sorghum cytosol, golgi, plasma membrane 67.1 69.54
OQU81206 Sorghum plasma membrane 66.91 67.54
EER98411 Sorghum plasma membrane 57.86 57.86
EES10479 Sorghum mitochondrion, plasma membrane 51.39 54.51
EES11845 Sorghum mitochondrion 53.79 53.39
EES03373 Sorghum plasma membrane 53.05 51.81
EER88333 Sorghum cytosol, mitochondrion, plasma membrane, plastid 50.46 47.64
OQU87272 Sorghum plasma membrane 48.61 38.12
Protein Annotations
MapMan:24.2.2.6MapMan:25.3.2.1UniProt:A0A1B6QQQ4GO:GO:0003674GO:GO:0005215GO:GO:0005315
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005887GO:GO:0006810GO:GO:0006817
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846
EnsemblPlants:KXG40235ProteinID:KXG40235ProteinID:KXG40235.1InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
PFAM:PF00083PFscan:PS50850PANTHER:PTHR24064PANTHER:PTHR24064:SF232InterPro:Phos_permeaseEnsemblPlantsGene:SORBI_3001G513400
SUPFAM:SSF103473TIGRFAMs:TIGR00887TMHMM:TMhelixUniParc:UPI0003C649EBSEG:seg:
Description
hypothetical protein
Coordinates
chr1:+:78080336..78082242
Molecular Weight (calculated)
58249.6 Da
IEP (calculated)
6.923
GRAVY (calculated)
0.341
Length
541 amino acids
Sequence
(BLAST)
001: MAGGQGQNME VLSALDGART QWYHFTAIIV AGMGFFTDAY DLFCISLVTK LIGRIYYTVD GSPKPGSLPP HVSSPVNGVA FVGTLSGQLF FGWLGDRVGR
101: KSVYGMTLVT MIVCSVASGL SFGYSPACVM ATLCFFRFWL GFGIGGDYPL SATIMSEYAN KKTRGAFVAA VFAMQGFGIL AAGAVAIGVS ALFRSPFPAP
201: PYDVDPAAST PAEADLVWRI ILMFGAVPAA LTFYSRMNMP ETARYTALVA RNAERAAADM SRVLQVDIGN KEEGPETQPR CRGEPQEEAT TVPPPPPPFG
301: LFSREFFHRH GLHLLGTTST WLLLDIAYYS QNLFQKDLFS AVGWIPAAET MSALDELFHI ARAQTLIALC GTVPGYWFTV AFIDVVGRFA IQAVGFLMMA
401: AFMLGLAVPY DRWTRPGNQT GFVVMYALTF FFANFGPNAT TFIVPAEIYP ARFRATCHGI SAASGKVGAI IGSFGFLYLA QSQDPAKTAH GYPPGIGVRN
501: SLLLLAGCSF LGFLLTFLVP EPKGKSLEEL SRETEPGAAE P
Best Arabidopsis Sequence Match ( AT3G54700.1 )
(BLAST)
001: MAGDQLNVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVDGSE KPGTLPPNVS AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG SNPKTVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILTGG IFAIIVSAAF EAKFPAPTYQ
201: IDALASTVPQ ADYVWRIILM VGALPAAMTY YSRSKMPETA RYTALVAKDA KLAASNMSKV LQVEIEAEQQ GTEDKSNSFG LFSKEFMKRH GLHLLGTTST
301: WFLLDIAFYS QNLFQKDIFS AIGWIPPAQT MNAIQEVFKI ARAQTLIALC STVPGYWFTV AFIDVIGRFA IQMMGFFFMT VFMFALAIPY DHWTHKENRI
401: GFVAMYSLTF FFANFGPNAT TFVVPAEIFP ARFRSTCHGI SAASGKLGAM VGAFGFLYLA QSPDKTKTEH GYPPGIGVKN SLIVLGVVNL LGMVFTLLVP
501: ESKGKSLEEM SGENEQNDES SSSSNNNSNN AVSTA
Arabidopsis Description
PHT1-7Probable inorganic phosphate transporter 1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q494P0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.