Factsheet for TraesCS4D01G329900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:	endoplasmic reticulum, peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G333700.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	99.05	99.05
TraesCS5A01G504400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	97.35	98.28
HORVU4Hr1G080730.2	Barley	endoplasmic reticulum, peroxisome	94.51	91.56
Os03t0136400-01	Rice	plasma membrane	84.85	85.17
Zm00001d027549_P001	Maize	plasma membrane	83.52	81.22
KXG40235	Sorghum	plasma membrane	82.77	80.78
GSMUA_Achr6P30290_001	Banana	cytosol, plasma membrane, vacuole	65.34	77.18
TraesCS4D01G313600.1	Wheat	plasma membrane	74.24	73.13
TraesCS5D01G512900.1	Wheat	plasma membrane	74.05	72.95
TraesCS5D01G513000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	60.04	72.05
TraesCS5D01G472000.1	Wheat	plasma membrane	71.78	70.32
TraesCS4D01G313700.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	68.56	69.48
TraesCS4D01G313800.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	68.56	68.95
TraesCS6D01G211600.1	Wheat	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	60.98	60.41
TraesCS2D01G045700.1	Wheat	mitochondrion, plasma membrane	55.11	55.85
TraesCS7D01G064200.1	Wheat	mitochondrion	57.2	54.41
TraesCS7D01G064900.1	Wheat	mitochondrion	57.01	54.14
TraesCS4D01G010900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	56.63	54.07
TraesCS2D01G045600.1	Wheat	mitochondrion	53.6	53.5
TraesCS7D01G227800.1	Wheat	plasma membrane	51.89	48.58

Protein Annotations

MapMan:24.2.2.6	MapMan:25.3.2.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005315	GO:GO:0005575
GO:GO:0006810	GO:GO:0006817	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PFscan:PS50850	PANTHER:PTHR24064	PANTHER:PTHR24064:SF232	InterPro:Phos_permease	SUPFAM:SSF103473	TIGRFAMs:TIGR00887
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G329900	EnsemblPlants:TraesCS4D01G329900.1	TIGR:cd06174	SEG:seg	:

Description

No Description!

Coordinates

chr4D:+:488468797..488470383

Molecular Weight (calculated)

57074.8 Da

IEP (calculated)

8.255

GRAVY (calculated)

0.449

Length

528 amino acids

Sequence
(BLAST)

001: MAGDQVHVLS ALDGAKTQWY HFTAIIVAGM GFFTDAYDLF CISLVTKLIG RIYYTVPGSS RPGSLPPTVS AVVNGVAFVG TLSGQLFFGW LGDKVGRKSV
101: YGMTLMLMIL CSVASGLSFG NTPTSVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKRT RGAFIAAVFA MQGFGILAGG GVAIGITALF RDLFPAPPYA
201: ADPAASTPAQ ADYVWRIVLM LGALPAALTF YWRMKMPETA RYTALIAKNA ERAAADMSKV LQVEITKEQA GDLETVITIK SHTPPPSFGL FSGEFVRRHG
301: LHLVGTASTW LLLDIAYYSQ NLFQKDIFSA IGWIPPAPTM SALDELFHIA RAQILIALCG TVPGYWFTVA FIDSVGRFKI QLMGFFMMTT FMVGLAVPYD
401: YWTGQGHQAG FVVMYALTFF FANFGPNATT FIVPAEIYPA RLRATCHGIS AASGKVGAII GSFGFLYLAQ SPDPAKTAHG YHPGIGVRYS LLVLAGCSLM
501: GFLLTFLVPE PKGKSLEEMS RETEPDHC

Best Arabidopsis Sequence Match ( AT2G38940.1 )
(BLAST)

001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV

Arabidopsis Description

PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.